RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 TPRG1Q6ZUI0 275 aa16.85■□□□□ 0.29
SHOX-201ENST00000334060 GJD3Q8N144 294 aa16.85■□□□□ 0.29
SHOX-201ENST00000334060 TERB1Q8NA31 727 aa16.85■□□□□ 0.29
SHOX-201ENST00000334060 OR6K2Q8NGY2 324 aa16.85■□□□□ 0.29
SHOX-201ENST00000334060 VOPP1Q96AW1 172 aa16.85■□□□□ 0.29
SHOX-201ENST00000334060 MRGPRX3Q96LB0 322 aa16.85■□□□□ 0.29
SHOX-201ENST00000334060 GORASP1Q9BQQ3 440 aa16.85■□□□□ 0.29
SHOX-201ENST00000334060 MAGEH1Q9H213 219 aa16.85■□□□□ 0.29
SHOX-201ENST00000334060 C2orf42Q9NWW7 574 aa16.85■□□□□ 0.29
SHOX-201ENST00000334060 KIAA1522Q9P206 1035 aaPredicted RBP16.85■□□□□ 0.29
SHOX-201ENST00000334060 MUC22E2RYF6 1773 aaPredicted RBP16.85■□□□□ 0.29
SHOX-201ENST00000334060 K7EQS6 105 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 PRAMEF11O60813 436 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 PHF2O75151 1096 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 ZNF821O75541 412 aaPredicted RBP16.84■□□□□ 0.29
SHOX-201ENST00000334060 SERPINB6P35237 376 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 CETN2P41208 172 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 OXCT1P55809 520 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 WHAMMP3Q1A5X7 153 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 SLC44A4Q53GD3 710 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 SLC45A4Q5BKX6 768 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 EGFLAMQ63HQ2 1017 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 GRAMD4Q6IC98 578 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 CCDC137Q6PK04 289 aaKnown RBP16.84■□□□□ 0.29
SHOX-201ENST00000334060 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.84■□□□□ 0.29
SHOX-201ENST00000334060 TSEN2Q8NCE0 465 aaKnown RBP16.84■□□□□ 0.29
SHOX-201ENST00000334060 HDAC11Q96DB2 347 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 CCDC114Q96M63 670 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 TNKS2Q9H2K2 1166 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 PRKAG3Q9UGI9 489 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 MYO18AQ92614 2054 aaKnown RBP16.84■□□□□ 0.29
SHOX-201ENST00000334060 MCF2LO15068 1137 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 TTI1O43156 1089 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 KDELR3O43731 214 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 PDGFBP01127 241 aaPredicted RBP16.84■□□□□ 0.29
SHOX-201ENST00000334060 JCHAINP01591 159 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 HLA-DQB2P05538 268 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 ZFXP17010 805 aaPredicted RBP16.84■□□□□ 0.29
SHOX-201ENST00000334060 PTPN3P26045 913 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 CD68P34810 354 aaPredicted RBP16.84■□□□□ 0.29
SHOX-201ENST00000334060 PAFAH1B1P43034 410 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 PTGIRP43119 386 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 SLC7A5Q01650 507 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 CYTH1Q15438 398 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 CCNG2Q16589 344 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 PARP15Q460N3 678 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 ZNF572Q7Z3I7 529 aaPredicted RBP16.84■□□□□ 0.29
SHOX-201ENST00000334060 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.84■□□□□ 0.29
SHOX-201ENST00000334060 KIAA1958Q8N8K9 716 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 TFB1MQ8WVM0 346 aaKnown RBP16.84■□□□□ 0.29
SHOX-201ENST00000334060 NKD2Q969F2 451 aaPredicted RBP16.84■□□□□ 0.29
SHOX-201ENST00000334060 AGAP3Q96P47 875 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 XPO6Q96QU8 1125 aaKnown RBP16.84■□□□□ 0.29
SHOX-201ENST00000334060 TM6SF2Q9BZW4 377 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 FOXQ1Q9C009 403 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 NDRG2Q9UN36 371 aaKnown RBP16.84■□□□□ 0.29
SHOX-201ENST00000334060 SORCS3Q9UPU3 1222 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 ZNF148Q9UQR1 794 aa16.84■□□□□ 0.29
SHOX-201ENST00000334060 TBC1D3BA6NDS4 549 aa16.83■□□□□ 0.28
SHOX-201ENST00000334060 TTC34A8MYJ7 566 aa16.83■□□□□ 0.28
SHOX-201ENST00000334060 RAD51CO43502 376 aa16.83■□□□□ 0.28
SHOX-201ENST00000334060 IFNB1P01574 187 aa16.83■□□□□ 0.28
SHOX-201ENST00000334060 ATXN7L2Q5T6C5 722 aaPredicted RBP16.83■□□□□ 0.28
SHOX-201ENST00000334060 ACBD5Q5T8D3 534 aaPredicted RBP16.83■□□□□ 0.28
SHOX-201ENST00000334060 Q6ZS52 159 aa16.83■□□□□ 0.28
SHOX-201ENST00000334060 CCDC13Q8IYE1 715 aa16.83■□□□□ 0.28
SHOX-201ENST00000334060 ZNF567Q8N184 647 aa16.83■□□□□ 0.28
SHOX-201ENST00000334060 C12orf50Q8NA57 414 aaPredicted RBP16.83■□□□□ 0.28
SHOX-201ENST00000334060 P2RY13Q9BPV8 354 aa16.83■□□□□ 0.28
SHOX-201ENST00000334060 SP110Q9HB58 689 aa16.83■□□□□ 0.28
SHOX-201ENST00000334060 SLC2A4RGQ9NR83 387 aa16.83■□□□□ 0.28
SHOX-201ENST00000334060 TTLL3Q9Y4R7 772 aa16.83■□□□□ 0.28
SHOX-201ENST00000334060 ARHGAP42A6NI28 874 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 ATP8B1O43520 1251 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 BNIP3LO60238 219 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 SRCP12931 536 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 NR2C2P49116 596 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 YBEYP58557 167 aaPredicted RBP16.82■□□□□ 0.28
SHOX-201ENST00000334060 PDK1Q15118 436 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 LZTR1Q8N653 840 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 DCAF4L2Q8NA75 395 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 HTR3CQ8WXA8 447 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 PNKPQ96T60 521 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 LRRC1Q9BTT6 524 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 CACNA2D2Q9NY47 1150 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 UBP1Q9NZI7 540 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 SLC27A6Q9Y2P4 619 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 NEU2Q9Y3R4 380 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 SGK1O00141 431 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 INSIG1O15503 277 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 ZBTB24O43167 697 aaPredicted RBP16.82■□□□□ 0.28
SHOX-201ENST00000334060 TMCC1O94876 653 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 METTL18O95568 372 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 PLK1P53350 603 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 NR1H3Q13133 447 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 MTM1Q13496 603 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 C2orf27AQ580R0 203 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 SIX5Q8N196 739 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 NT5MQ9NPB1 228 aa16.82■□□□□ 0.28
SHOX-201ENST00000334060 ELOVL2Q9NXB9 296 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms