RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 FAM156AQ8NDB6 213 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 HSFY1Q96LI6 401 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 KCNK16Q96T55 309 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 CDRT15Q96T59 188 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 APBA2Q99767 749 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 NAT9Q9BTE0 207 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 TMEM30AQ9NV96 361 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 BFARQ9NZS9 450 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 ZDHHC2Q9UIJ5 367 aa12.55□□□□□ -0.4
VPS33B-201ENST00000333371 PIGNO95427 931 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 AP2A1O95782 977 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 GLDCP23378 1020 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 DPP6P42658 865 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 NAGLUP54802 743 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 PAFAH1B3Q15102 231 aaKnown RBP12.54□□□□□ -0.4
VPS33B-201ENST00000333371 PDK3Q15120 406 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 TLR1Q15399 786 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 ARL13AQ5H913 290 aaPredicted RBP12.54□□□□□ -0.4
VPS33B-201ENST00000333371 NXNQ6DKJ4 435 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 ALKAL1Q6UXT8 129 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 ARRDC4Q8NCT1 418 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 KCTD4Q8WVF5 259 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 RCN3Q96D15 328 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 PLEKHA5Q9HAU0 1116 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 ZDHHC7Q9NXF8 308 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 PIN4Q9Y237 131 aaKnown RBP12.54□□□□□ -0.4
VPS33B-201ENST00000333371 TIMM13Q9Y5L4 95 aaPredicted RBP12.54□□□□□ -0.4
VPS33B-201ENST00000333371 XPO1O14980 1071 aaKnown RBP12.54□□□□□ -0.4
VPS33B-201ENST00000333371 GPR32O75388 356 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 DAB1O75553 588 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 HOXD8P13378 290 aaPredicted RBP12.54□□□□□ -0.4
VPS33B-201ENST00000333371 TCN1P20061 433 aaPredicted RBP12.54□□□□□ -0.4
VPS33B-201ENST00000333371 NOS2P35228 1153 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 ACADSBP45954 432 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 ALDH1A3P47895 512 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 GRIA4P48058 902 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 TKTL1P51854 596 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 MS4A2Q01362 244 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 RBBP5Q15291 538 aaKnown RBP12.54□□□□□ -0.4
VPS33B-201ENST00000333371 PDCD2Q16342 344 aaPredicted RBP12.54□□□□□ -0.4
VPS33B-201ENST00000333371 CLEC20AQ6ZU45 233 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 OTOP3Q7RTS5 596 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 DSELQ8IZU8 1212 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 EDEM1Q92611 657 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 OMDQ99983 421 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 MED10Q9BTT4 135 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 ACE2Q9BYF1 805 aaPredicted RBP12.54□□□□□ -0.4
VPS33B-201ENST00000333371 ULBP1Q9BZM6 244 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 RRAGCQ9HB90 399 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 LRRC4Q9HBW1 653 aa12.54□□□□□ -0.4
VPS33B-201ENST00000333371 FBXO21O94952 628 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 SMIM10L2AP0DMW4 78 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 SMIM10L2BP0DMW5 78 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 CYP2C9P11712 490 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 MYL4P12829 197 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 ENO3P13929 434 aaPredicted RBP12.53□□□□□ -0.4
VPS33B-201ENST00000333371 ADRA1BP35368 520 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 TPI1P60174 286 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 NAB1Q13506 487 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 FSCBQ5H9T9 825 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 WSCD1Q658N2 575 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 ST13P4Q8IZP2 240 aaPredicted RBP12.53□□□□□ -0.4
VPS33B-201ENST00000333371 TMEM151AQ8N4L1 468 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 SPATA22Q8NHS9 363 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 WNT8BQ93098 351 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 NT5C3BQ969T7 300 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 SGF29Q96ES7 293 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 SCYL1Q96KG9 808 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 RTKNQ9BST9 563 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 DUSP16Q9BY84 665 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 RHOBTB2Q9BYZ6 727 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 FAM192AQ9GZU8 254 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 CASS4Q9NQ75 786 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 OXSMQ9NWU1 459 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 UBAP1Q9NZ09 502 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 UBQLN1Q9UMX0 589 aaKnown RBP12.53□□□□□ -0.4
VPS33B-201ENST00000333371 FIS1Q9Y3D6 152 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 NRCAMQ92823 1304 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 GRID2O43424 1007 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 HUS1O60921 280 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 JCHAINP01591 159 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 CYP2B6P20813 491 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 GABRB3P28472 473 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 LILRA4P59901 499 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 ZNF280DQ6N043 979 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 NOTUMQ6P988 496 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 PAOXQ6QHF9 649 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 TMC7Q7Z402 723 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 KDELC2Q7Z4H8 507 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 SLC41A1Q8IVJ1 513 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 DENND6AQ8IWF6 608 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 SIX6OS1Q8N1H7 587 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 SNX31Q8N9S9 440 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 JADE3Q92613 823 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 ISL2Q96A47 359 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 LENG1Q96BZ8 264 aaPredicted RBP12.53□□□□□ -0.4
VPS33B-201ENST00000333371 ZFP42Q96MM3 310 aa12.53□□□□□ -0.4
VPS33B-201ENST00000333371 ILKAPQ9H0C8 392 aaPredicted RBP12.53□□□□□ -0.4
VPS33B-201ENST00000333371 FAM124BQ9H5Z6 455 aaPredicted RBP12.53□□□□□ -0.4
VPS33B-201ENST00000333371 OCEL1Q9H607 264 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms