RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 PIGNO95427 931 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 RAG1P15918 1043 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 LRPAP1P30533 357 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 PRKAA2P54646 552 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 SCAPQ12770 1279 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 ZBTB17Q13105 803 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 MMEL1Q495T6 779 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 SLC9B1Q4ZJI4 515 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 LDLRAD1Q5T700 205 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 EPGNQ6UW88 154 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 PAQR9Q6ZVX9 377 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 SETD3Q86TU7 594 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 KBTBD2Q8IY47 623 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 AFAP1L2Q8N4X5 818 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 NPWQ8N729 165 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 KYQ8NBH2 561 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 ARRDC4Q8NCT1 418 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 LENG1Q96BZ8 264 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 LENG8Q96PV6 779 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 DDX50Q9BQ39 737 aaKnown RBP11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 SGIP1Q9BQI5 828 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 NUF2Q9BZD4 464 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 RHOJQ9H4E5 214 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 WDR55Q9H6Y2 383 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 CRTAC1Q9NQ79 661 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 SNX10Q9Y5X0 201 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 SLCO1B7G3V0H7 640 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 CABYRO75952 493 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 VAPBO95292 243 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 STMN1P16949 149 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 YY1P25490 414 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 NMBRP28336 390 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 EPHA3P29320 983 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 TUBP50607 506 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 GRM3Q14832 879 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 TMC7Q7Z402 723 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 MAVSQ7Z434 540 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 SNX32Q86XE0 403 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 RDH11Q8TC12 318 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 GDPD5Q8WTR4 605 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 RTKNQ9BST9 563 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 TRIM62Q9BVG3 475 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 OXCT2Q9BYC2 517 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 WDR6Q9NNW5 1121 aaKnown RBP11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 PAPOLBQ9NRJ5 636 aaKnown RBP11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 PTCH2Q9Y6C5 1203 aa11.9□□□□□ -0.5
CSPG4P4Y-201ENST00000333235 LYNP07948 512 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 ITGAXP20702 1163 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 MPSTP25325 297 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 CRABP2P29373 138 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 PRDX6P30041 224 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 BEX3Q00994 111 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 GALNT2Q10471 571 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 CYLC2Q14093 348 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 UBXN11Q5T124 520 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 KDELC2Q7Z4H8 507 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 ZNF354CQ86Y25 554 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 SMG8Q8ND04 991 aaKnown RBP11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 SPDYE1Q8NFV5 336 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 NPLOC4Q8TAT6 608 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 LRGUKQ96M69 825 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 SMOQ99835 787 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 CENPKQ9BS16 269 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 OXSMQ9NWU1 459 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 CDH9Q9ULB4 789 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 RGSL1A5PLK6 1076 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 CASTOR2A6NHX0 329 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 FAM163BP0C2L3 166 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 ENO3P13929 434 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 ALOX15P16050 662 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 PDCD2Q16342 344 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 PCID2Q5JVF3 399 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 DCLRE1AQ6PJP8 1040 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 OTOP3Q7RTS5 596 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 CTU1Q7Z7A3 348 aaKnown RBP11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 MLPHQ9BV36 600 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 TRIM4Q9C037 500 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 ACSS2Q9NR19 701 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 FIS1Q9Y3D6 152 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 PTGESO14684 152 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 PMPCBO75439 489 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 CHRNGP07510 517 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 CLCNKBP51801 687 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 FAM110CQ1W6H9 321 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 XKR4Q5GH76 650 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 ARL13AQ5H913 290 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 NAPRTQ6XQN6 538 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 KCTD4Q8WVF5 259 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 BRI3BPQ8WY22 251 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 ELMO2Q96JJ3 720 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 OR52B2Q96RD2 323 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 Q9H521 79 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 GTSE1Q9NYZ3 720 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 VTI1BQ9UEU0 232 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 SLC45A1Q9Y2W3 748 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 LRRC37A2A6NM11 1700 aa11.89□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 G3V2L1 256 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 GABRDO14764 452 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 ADCY6O43306 1168 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 B3GAT3O94766 335 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms