RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 SBK3P0C264 359 aa17.02■□□□□ 0.32
SSH1-201ENST00000326470 PTPN1P18031 435 aaKnown RBP17.02■□□□□ 0.32
SSH1-201ENST00000326470 ALDH3B2P48448 385 aa17.02■□□□□ 0.32
SSH1-201ENST00000326470 CSRP3P50461 194 aa17.02■□□□□ 0.32
SSH1-201ENST00000326470 TRIM74Q86UV6 250 aa17.02■□□□□ 0.32
SSH1-201ENST00000326470 TRIM73Q86UV7 250 aa17.02■□□□□ 0.32
SSH1-201ENST00000326470 FAM131BQ86XD5 332 aa17.02■□□□□ 0.32
SSH1-201ENST00000326470 PSTKQ8IV42 348 aaKnown RBP17.02■□□□□ 0.32
SSH1-201ENST00000326470 ASB9Q96DX5 294 aa17.02■□□□□ 0.32
SSH1-201ENST00000326470 TMA16Q96EY4 203 aaKnown RBP17.02■□□□□ 0.32
SSH1-201ENST00000326470 VPS39Q96JC1 886 aa17.02■□□□□ 0.32
SSH1-201ENST00000326470 TASP1Q9H6P5 420 aa17.02■□□□□ 0.32
SSH1-201ENST00000326470 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.02■□□□□ 0.32
SSH1-201ENST00000326470 COPG1Q9Y678 874 aaKnown RBP17.02■□□□□ 0.32
SSH1-201ENST00000326470 ZSCAN9O15535 394 aaPredicted RBP17.01■□□□□ 0.31
SSH1-201ENST00000326470 USP12O75317 370 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 AP2A1O95782 977 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 TCN1P20061 433 aaPredicted RBP17.01■□□□□ 0.31
SSH1-201ENST00000326470 CDK9P50750 372 aaKnown RBP17.01■□□□□ 0.31
SSH1-201ENST00000326470 NAGLUP54802 743 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 PTK2BQ14289 1009 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 CYTH1Q15438 398 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 NRF1Q16656 503 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 ARHGAP17Q68EM7 881 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 NT5DC4Q86YG4 428 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 TRIML2Q8N7C3 387 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 ATP6V1E2Q96A05 226 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 PPP1R14BQ96C90 147 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 NPAS2Q99743 824 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 OSBPL11Q9BXB4 747 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 C1QTNF1Q9BXJ1 281 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 ANKRD6Q9Y2G4 727 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 AP4S1Q9Y587 144 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 H6PDO95479 791 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 JUNP05412 331 aaKnown RBP17.01■□□□□ 0.31
SSH1-201ENST00000326470 C8BP07358 591 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 LCP1P13796 627 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 HADHAP40939 763 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 PSMD8P48556 350 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 GALK1P51570 392 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 POU5F1BQ06416 359 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 KIZQ2M2Z5 673 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 CELF3Q5SZQ8 465 aaKnown RBP17.01■□□□□ 0.31
SSH1-201ENST00000326470 CARM1Q86X55 608 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 LSMEM2Q8N112 164 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 FAM156AQ8NDB6 213 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 RNF139Q8WU17 664 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 MFSD3Q96ES6 412 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 MARK4Q96L34 752 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 COQ10BQ9H8M1 238 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 CASS4Q9NQ75 786 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 UTP6Q9NYH9 597 aaKnown RBP17.01■□□□□ 0.31
SSH1-201ENST00000326470 SQORQ9Y6N5 450 aa17.01■□□□□ 0.31
SSH1-201ENST00000326470 LTBP3Q9NS15 1303 aa17■□□□□ 0.31
SSH1-201ENST00000326470 ARHGEF37A1IGU5 675 aa17■□□□□ 0.31
SSH1-201ENST00000326470 HBP1O60381 514 aa17■□□□□ 0.31
SSH1-201ENST00000326470 PEX10O60683 326 aa17■□□□□ 0.31
SSH1-201ENST00000326470 HSPA1AP0DMV8 641 aaKnown RBP17■□□□□ 0.31
SSH1-201ENST00000326470 HSPA1BP0DMV9 641 aaKnown RBP17■□□□□ 0.31
SSH1-201ENST00000326470 ARF4P18085 180 aaPredicted RBP17■□□□□ 0.31
SSH1-201ENST00000326470 RPL34P49207 117 aaKnown RBP17■□□□□ 0.31
SSH1-201ENST00000326470 COG7P83436 770 aa17■□□□□ 0.31
SSH1-201ENST00000326470 IKBKEQ14164 716 aa17■□□□□ 0.31
SSH1-201ENST00000326470 TRIM25Q14258 630 aaKnown RBP17■□□□□ 0.31
SSH1-201ENST00000326470 LPIN1Q14693 890 aa17■□□□□ 0.31
SSH1-201ENST00000326470 ANO4Q32M45 955 aa17■□□□□ 0.31
SSH1-201ENST00000326470 KCNMB4Q86W47 210 aa17■□□□□ 0.31
SSH1-201ENST00000326470 KIF12Q96FN5 646 aa17■□□□□ 0.31
SSH1-201ENST00000326470 KLHL8Q9P2G9 620 aaPredicted RBP17■□□□□ 0.31
SSH1-201ENST00000326470 SUCOQ9UBS9 1254 aaKnown RBP17■□□□□ 0.31
SSH1-201ENST00000326470 HACL1Q9UJ83 578 aa17■□□□□ 0.31
SSH1-201ENST00000326470 TLK1Q9UKI8 766 aa17■□□□□ 0.31
SSH1-201ENST00000326470 SLC39A10Q9ULF5 831 aa17■□□□□ 0.31
SSH1-201ENST00000326470 FZD1Q9UP38 647 aa17■□□□□ 0.31
SSH1-201ENST00000326470 C9IYK1 514 aa17■□□□□ 0.31
SSH1-201ENST00000326470 DDHD2O94830 711 aa17■□□□□ 0.31
SSH1-201ENST00000326470 SLC26A2P50443 739 aa17■□□□□ 0.31
SSH1-201ENST00000326470 BST2Q10589 180 aaKnown RBP17■□□□□ 0.31
SSH1-201ENST00000326470 PAFAH1B3Q15102 231 aaKnown RBP17■□□□□ 0.31
SSH1-201ENST00000326470 C7orf31Q8N865 590 aa17■□□□□ 0.31
SSH1-201ENST00000326470 DNAAF3Q8N9W5 541 aa17■□□□□ 0.31
SSH1-201ENST00000326470 ZSCAN18Q8TBC5 510 aaPredicted RBP17■□□□□ 0.31
SSH1-201ENST00000326470 TSNARE1Q96NA8 513 aa17■□□□□ 0.31
SSH1-201ENST00000326470 GPR22Q99680 433 aa17■□□□□ 0.31
SSH1-201ENST00000326470 LPIN3Q9BQK8 851 aa17■□□□□ 0.31
SSH1-201ENST00000326470 C20orf96Q9NUD7 363 aaPredicted RBP17■□□□□ 0.31
SSH1-201ENST00000326470 ADA2Q9NZK5 511 aa17■□□□□ 0.31
SSH1-201ENST00000326470 A0A087WZ62 844 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 H3BNH8 94 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 KCNK1O00180 336 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 NFKBIEO00221 500 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 MATKP42679 507 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 PSME3P61289 254 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 ANKRD52Q8NB46 1076 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 STYXQ8WUJ0 223 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 TOP1MTQ969P6 601 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 TMIGD2Q96BF3 282 aa16.99■□□□□ 0.31
SSH1-201ENST00000326470 FDXACB1Q9BRP7 624 aaPredicted RBP16.99■□□□□ 0.31
SSH1-201ENST00000326470 MRPL40Q9NQ50 206 aaKnown RBP16.99■□□□□ 0.31
SSH1-201ENST00000326470 ZNF510Q9Y2H8 683 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms