RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 SLC7A6OSQ96CW6 309 aaPredicted RBP10.85□□□□□ -0.67
CUL4A-201ENST00000326335 GKN1Q9NS71 199 aa10.85□□□□□ -0.67
CUL4A-201ENST00000326335 USP3Q9Y6I4 520 aa10.85□□□□□ -0.67
CUL4A-201ENST00000326335 TLL2Q9Y6L7 1015 aa10.85□□□□□ -0.67
CUL4A-201ENST00000326335 UBA6A0AVT1 1052 aaPredicted RBP10.84□□□□□ -0.67
CUL4A-201ENST00000326335 NCF1BA6NI72 391 aaPredicted RBP10.84□□□□□ -0.67
CUL4A-201ENST00000326335 NCF1CA8MVU1 366 aaPredicted RBP10.84□□□□□ -0.67
CUL4A-201ENST00000326335 GABRDO14764 452 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 NCF1P14598 390 aaPredicted RBP10.84□□□□□ -0.67
CUL4A-201ENST00000326335 PGAM1P18669 254 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 MPSTP25325 297 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 ACLYP53396 1101 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 TAF11Q15544 211 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 HABP4Q5JVS0 413 aaKnown RBP10.84□□□□□ -0.67
CUL4A-201ENST00000326335 ATG16L1Q676U5 607 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 SLC45A3Q96JT2 553 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 TSNARE1Q96NA8 513 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 CADM1Q9BY67 442 aaKnown RBP10.84□□□□□ -0.67
CUL4A-201ENST00000326335 FRMD8P1Q9BZ68 369 aaPredicted RBP10.84□□□□□ -0.67
CUL4A-201ENST00000326335 IPO11Q9UI26 975 aaKnown RBP10.84□□□□□ -0.67
CUL4A-201ENST00000326335 TBKBP1A7MCY6 615 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 HLA-DQB2P05538 268 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 DLDP09622 509 aaKnown RBP10.84□□□□□ -0.67
CUL4A-201ENST00000326335 CPA3P15088 417 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 CCR1P32246 355 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 FDFT1P37268 417 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 FKBP1BP68106 108 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 DPYSQ14117 519 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 PRPSAP1Q14558 356 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 PRKD1Q15139 912 aaPredicted RBP10.84□□□□□ -0.67
CUL4A-201ENST00000326335 LINGO4Q6UY18 593 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 TAS1R1Q7RTX1 841 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 ALKBH8Q96BT7 664 aaKnown RBP10.84□□□□□ -0.67
CUL4A-201ENST00000326335 VPS39Q96JC1 886 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 OLFM3Q96PB7 478 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 ABCG8Q9H221 673 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 LRRC40Q9H9A6 602 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 KCNK13Q9HB14 408 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 TRPC7Q9HCX4 862 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 TBC1D13Q9NVG8 400 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 FAM8A1Q9UBU6 413 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 TRIOO75962 3097 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 A0A0U1RQF3 1178 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 BPGMP07738 259 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 CKBP12277 381 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 ARRB2P32121 409 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 ACVRL1P37023 503 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 CDK16Q00536 496 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 SP3Q02447 781 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 CUL3Q13618 768 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 MBTPS1Q14703 1052 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 CLLU1OSQ5K130 101 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 RNF180Q86T96 592 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 WDR75Q8IWA0 830 aaKnown RBP10.84□□□□□ -0.67
CUL4A-201ENST00000326335 NSL1Q96IY1 281 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 CRISPLD1Q9H336 500 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 WASF2Q9Y6W5 498 aa10.84□□□□□ -0.67
CUL4A-201ENST00000326335 GPR39O43194 453 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 MGRN1O60291 552 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 STAU1O95793 577 aaKnown RBP10.83□□□□□ -0.68
CUL4A-201ENST00000326335 HOXD8P13378 290 aaPredicted RBP10.83□□□□□ -0.68
CUL4A-201ENST00000326335 LRPAP1P30533 357 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 SERPINB6P35237 376 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 CSE1LP55060 971 aaKnown RBP10.83□□□□□ -0.68
CUL4A-201ENST00000326335 GALNTL6Q49A17 601 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 VARS2Q5ST30 1063 aaKnown RBP10.83□□□□□ -0.68
CUL4A-201ENST00000326335 C1orf146Q5VVC0 180 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 LRRC8BQ6P9F7 803 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 NAPRTQ6XQN6 538 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 ZNF276Q8N554 614 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 USP13Q92995 863 aaPredicted RBP10.83□□□□□ -0.68
CUL4A-201ENST00000326335 MYEOVQ96EZ4 313 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 HMCESQ96FZ2 354 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 C11orf84Q9BUA3 381 aaPredicted RBP10.83□□□□□ -0.68
CUL4A-201ENST00000326335 TAS2R1Q9NYW7 299 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 CDY1Q9Y6F8 540 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 FAM159BA6NKW6 160 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 SRRM3A6NNA2 597 aaPredicted RBP10.83□□□□□ -0.68
CUL4A-201ENST00000326335 GP5P40197 560 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 MUM1Q2TAK8 710 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 C4orf50Q6ZRC1 276 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 SCD5Q86SK9 330 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 ZNF598Q86UK7 904 aaKnown RBP10.83□□□□□ -0.68
CUL4A-201ENST00000326335 PHTF2Q8N3S3 785 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 RBM15BQ8NDT2 890 aaKnown RBP10.83□□□□□ -0.68
CUL4A-201ENST00000326335 URGCPQ8TCY9 931 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 ESAMQ96AP7 390 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 RAB3IPQ96QF0 476 aaPredicted RBP10.83□□□□□ -0.68
CUL4A-201ENST00000326335 BPIFA1Q9NP55 256 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 APOBEC2Q9Y235 224 aaKnown RBP10.83□□□□□ -0.68
CUL4A-201ENST00000326335 HS3ST4Q9Y661 456 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 COMMD10Q9Y6G5 202 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 E9PAM4 449 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 PROCP04070 461 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 BMP1P13497 986 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 GLDCP23378 1020 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 PRKCHP24723 683 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 OR1E1P30953 314 aa10.83□□□□□ -0.68
CUL4A-201ENST00000326335 RBM20Q5T481 1227 aaKnown RBP10.83□□□□□ -0.68
CUL4A-201ENST00000326335 CNSTQ6PJW8 725 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms