RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 BHMG1C9JSJ3 638 aaPredicted RBP15.59■□□□□ 0.09
PRPF3-201ENST00000324862 MUSKO15146 869 aa15.59■□□□□ 0.09
PRPF3-201ENST00000324862 MATN3O15232 486 aa15.59■□□□□ 0.09
PRPF3-201ENST00000324862 LMNB2Q03252 620 aa15.59■□□□□ 0.09
PRPF3-201ENST00000324862 GEN1Q17RS7 908 aa15.59■□□□□ 0.09
PRPF3-201ENST00000324862 FUT11Q495W5 492 aa15.59■□□□□ 0.09
PRPF3-201ENST00000324862 ANKRD22Q5VYY1 191 aa15.59■□□□□ 0.09
PRPF3-201ENST00000324862 CCDC70Q6NSX1 233 aa15.59■□□□□ 0.09
PRPF3-201ENST00000324862 YAF2Q8IY57 180 aa15.59■□□□□ 0.09
PRPF3-201ENST00000324862 GPR161Q8N6U8 529 aaKnown RBP15.59■□□□□ 0.09
PRPF3-201ENST00000324862 SORCS1Q8WY21 1168 aa15.59■□□□□ 0.09
PRPF3-201ENST00000324862 EXOC2Q96KP1 924 aa15.59■□□□□ 0.09
PRPF3-201ENST00000324862 RUNDC3BQ96NL0 473 aa15.59■□□□□ 0.09
PRPF3-201ENST00000324862 TSGA13Q96PP4 275 aa15.59■□□□□ 0.09
PRPF3-201ENST00000324862 GORASP1Q9BQQ3 440 aa15.59■□□□□ 0.09
PRPF3-201ENST00000324862 DNAJC17Q9NVM6 304 aaKnown RBP15.59■□□□□ 0.09
PRPF3-201ENST00000324862 OBP2AQ9NY56 170 aa15.59■□□□□ 0.09
PRPF3-201ENST00000324862 UBP1Q9NZI7 540 aa15.59■□□□□ 0.09
PRPF3-201ENST00000324862 VPS51Q9UID3 782 aa15.59■□□□□ 0.09
PRPF3-201ENST00000324862 A0A0A0MRY4 1105 aa15.58■□□□□ 0.09
PRPF3-201ENST00000324862 PRAMEF11O60813 436 aa15.58■□□□□ 0.09
PRPF3-201ENST00000324862 HLA-DQB2P05538 268 aa15.58■□□□□ 0.09
PRPF3-201ENST00000324862 OXCT1P55809 520 aa15.58■□□□□ 0.09
PRPF3-201ENST00000324862 BASP1P80723 227 aaKnown RBP15.58■□□□□ 0.09
PRPF3-201ENST00000324862 TEX44Q53QW1 395 aa15.58■□□□□ 0.09
PRPF3-201ENST00000324862 IER5LQ5T953 404 aa15.58■□□□□ 0.09
PRPF3-201ENST00000324862 PGBD5Q8N414 524 aa15.58■□□□□ 0.09
PRPF3-201ENST00000324862 SPATA13Q96N96 652 aa15.58■□□□□ 0.09
PRPF3-201ENST00000324862 ETNK1Q9HBU6 452 aa15.58■□□□□ 0.09
PRPF3-201ENST00000324862 RAB6BQ9NRW1 208 aa15.58■□□□□ 0.09
PRPF3-201ENST00000324862 RBM22Q9NW64 420 aaKnown RBP eCLIP15.58■□□□□ 0.09
PRPF3-201ENST00000324862 THG1LQ9NWX6 298 aaKnown RBP15.58■□□□□ 0.09
PRPF3-201ENST00000324862 C5orf60A6NFR6 353 aa15.58■□□□□ 0.08
PRPF3-201ENST00000324862 GOLGA8MH3BSY2 632 aa15.58■□□□□ 0.08
PRPF3-201ENST00000324862 ARNTLO00327 626 aa15.58■□□□□ 0.08
PRPF3-201ENST00000324862 ZMPSTE24O75844 475 aa15.58■□□□□ 0.08
PRPF3-201ENST00000324862 PSMB4P28070 264 aa15.58■□□□□ 0.08
PRPF3-201ENST00000324862 STK19P49842 368 aaPredicted RBP15.58■□□□□ 0.08
PRPF3-201ENST00000324862 PLTPP55058 493 aa15.58■□□□□ 0.08
PRPF3-201ENST00000324862 RUNX3Q13761 415 aa15.58■□□□□ 0.08
PRPF3-201ENST00000324862 PLEKHG6Q3KR16 790 aa15.58■□□□□ 0.08
PRPF3-201ENST00000324862 PTCRAQ6ISU1 281 aaPredicted RBP15.58■□□□□ 0.08
PRPF3-201ENST00000324862 ZDHHC24Q6UX98 284 aa15.58■□□□□ 0.08
PRPF3-201ENST00000324862 TSEN2Q8NCE0 465 aaKnown RBP15.58■□□□□ 0.08
PRPF3-201ENST00000324862 FBXO25Q8TCJ0 367 aa15.58■□□□□ 0.08
PRPF3-201ENST00000324862 SEC14L1Q92503 715 aa15.58■□□□□ 0.08
PRPF3-201ENST00000324862 ATP2A3Q93084 1043 aa15.58■□□□□ 0.08
PRPF3-201ENST00000324862 TRMT61BQ9BVS5 477 aaKnown RBP15.58■□□□□ 0.08
PRPF3-201ENST00000324862 RAB17Q9H0T7 212 aa15.58■□□□□ 0.08
PRPF3-201ENST00000324862 DONSONQ9NYP3 566 aa15.58■□□□□ 0.08
PRPF3-201ENST00000324862 MARK1Q9P0L2 795 aa15.58■□□□□ 0.08
PRPF3-201ENST00000324862 TARSL2A2RTX5 802 aaKnown RBP15.57■□□□□ 0.08
PRPF3-201ENST00000324862 CFAP69A5D8W1 941 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 ANHXE9PGG2 379 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 KDELR3O43731 214 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 TULP3O75386 442 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 ECI2O75521 394 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 GCATO75600 419 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 SEC31AO94979 1220 aaKnown RBP15.57■□□□□ 0.08
PRPF3-201ENST00000324862 NFKB1P19838 968 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 ITGA8P53708 1063 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 IHHQ14623 411 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 PITRM1Q5JRX3 1037 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 IZUMO3Q5VZ72 239 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 SPATA22Q8NHS9 363 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 KCNK12Q9HB15 430 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 NT5MQ9NPB1 228 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 ZDHHC4Q9NPG8 344 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 KIAA1522Q9P206 1035 aaPredicted RBP15.57■□□□□ 0.08
PRPF3-201ENST00000324862 GGA2Q9UJY4 613 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 SMAD6O43541 496 aaKnown RBP15.57■□□□□ 0.08
PRPF3-201ENST00000324862 NFATC1O95644 943 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 ADH1CP00326 375 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 FAM153BP0C7A2 387 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 BMP1P13497 986 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 RGRP47804 291 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 KDSRQ06136 332 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 IL10RBQ08334 325 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 HLTFQ14527 1009 aaKnown RBP eCLIP15.57■□□□□ 0.08
PRPF3-201ENST00000324862 SMAD2Q15796 467 aaKnown RBP15.57■□□□□ 0.08
PRPF3-201ENST00000324862 FAM153CQ494X1 144 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 ARHGEF18Q6ZSZ5 1173 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 ETFBKMTQ8IXQ9 262 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 CPT1BQ92523 772 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 MAML1Q92585 1016 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 TEKT5Q96M29 485 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 IL12RB2Q99665 862 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 PHF7Q9BWX1 381 aaPredicted RBP15.57■□□□□ 0.08
PRPF3-201ENST00000324862 FBRSL1Q9HCM7 1045 aaKnown RBP15.57■□□□□ 0.08
PRPF3-201ENST00000324862 PIH1D1Q9NWS0 290 aaKnown RBP15.57■□□□□ 0.08
PRPF3-201ENST00000324862 FAM153AQ9UHL3 310 aa15.57■□□□□ 0.08
PRPF3-201ENST00000324862 FCF1Q9Y324 198 aaKnown RBP15.57■□□□□ 0.08
PRPF3-201ENST00000324862 CACNG3O60359 315 aa15.56■□□□□ 0.08
PRPF3-201ENST00000324862 TMEM63AO94886 807 aa15.56■□□□□ 0.08
PRPF3-201ENST00000324862 MT-CYBP00156 380 aaPredicted RBP15.56■□□□□ 0.08
PRPF3-201ENST00000324862 CISD3P0C7P0 127 aa15.56■□□□□ 0.08
PRPF3-201ENST00000324862 PABPC1P11940 636 aaKnown RBP15.56■□□□□ 0.08
PRPF3-201ENST00000324862 GJA4P35212 333 aa15.56■□□□□ 0.08
PRPF3-201ENST00000324862 GRIA1P42261 906 aa15.56■□□□□ 0.08
PRPF3-201ENST00000324862 SPARCL1Q14515 664 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms