RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 TMEM159Q96B96 161 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 HSD17B14Q9BPX1 270 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 MRPL9Q9BYD2 267 aaKnown RBP11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 MRPS26Q9BYN8 205 aaKnown RBP11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 CDT1Q9H211 546 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 SPG21Q9NZD8 308 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 SH3BP4Q9P0V3 963 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 CDH9Q9ULB4 789 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 C15orf38-AP3S2A0A0A6YYH1 394 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 PSMD12O00232 456 aaPredicted RBP11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 ZNF862O60290 1169 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 GSTM1P09488 218 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 DGKAP23743 735 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 GABRB2P47870 512 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 RFX3P48380 749 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 CHN2P52757 468 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 MRPS22P82650 360 aaKnown RBP11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 SLC25A3Q00325 362 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 TRIM25Q14258 630 aaKnown RBP11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 ARPINQ7Z6K5 226 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 PHACTR4Q8IZ21 702 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 SMAD5Q99717 465 aaKnown RBP11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 RNPEPQ9H4A4 650 aa11.07□□□□□ -0.64
SNRNP200-201ENST00000323853 ABCG1P45844 678 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 ALDH9A1P49189 494 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 C1DQ13901 141 aaKnown RBP11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 BOP1Q14137 746 aaKnown RBP11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 NEDD8Q15843 81 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 MFSD4BQ5TF39 518 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 TRMT11Q7Z4G4 463 aaKnown RBP11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 CLVS1Q8IUQ0 354 aaPredicted RBP11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 UTP15Q8TED0 518 aaKnown RBP11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 PANX3Q96QZ0 392 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 OPTCQ9UBM4 332 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 AP3M1Q9Y2T2 418 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 NRCAMQ92823 1304 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 CLCN5P51795 746 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 RTP1P59025 263 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 ACOX1Q15067 660 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 ARMC12Q5T9G4 340 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 SPPL2AQ8TCT8 520 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 RERGLQ9H628 205 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 MTF2Q9Y483 593 aaPredicted RBP11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 SNUPNO95149 360 aaKnown RBP11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 NAIF1Q69YI7 327 aaPredicted RBP11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 MTSS1LQ765P7 747 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 C12orf56Q8IXR9 622 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 KRT78Q8N1N4 520 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 PCDH20Q8N6Y1 951 aaKnown RBP11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 ACMSDQ8TDX5 336 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 MRPL48Q96GC5 212 aaKnown RBP11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 FAM126AQ9BYI3 521 aaPredicted RBP11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 CIPCQ9C0C6 399 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 GNPTGQ9UJJ9 305 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 SERPINA6P08185 405 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 AFTPHQ6ULP2 937 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 UNC5AQ6ZN44 842 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 OR5B17Q8NGF7 314 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 HSFY1Q96LI6 401 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 GLIS2Q9BZE0 524 aaPredicted RBP11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 TRPC4Q9UBN4 977 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 ANAPC2Q9UJX6 822 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 INVSQ9Y283 1065 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 TPRKBQ9Y3C4 175 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 MANSC4A6NHS7 340 aaPredicted RBP11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 ANPEPP15144 967 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 TYMPP19971 482 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 FLT3P36888 993 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 PREPLQ4J6C6 727 aaPredicted RBP11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 ZNF438Q7Z4V0 828 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 ANKRD52Q8NB46 1076 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 MCOLN3Q8TDD5 553 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 CDCA5Q96FF9 252 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 KLHL25Q9H0H3 589 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 RNF19AQ9NV58 838 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 PLA2G4CQ9UP65 541 aa11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 TNPO3Q9Y5L0 923 aaKnown RBP11.06□□□□□ -0.64
SNRNP200-201ENST00000323853 CD3EAPO15446 510 aaKnown RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 CCNB1P14635 433 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 GOT1P17174 413 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 LBPP18428 481 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 PPP2R1BP30154 601 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 MAGEA10P43363 369 aaPredicted RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 RAB10P61026 200 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 KCNJ2P63252 427 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 BEX3Q00994 111 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 PCBP1Q15365 356 aaKnown RBP eCLIP11.05□□□□□ -0.643e-6■■□□□ 11.5
SNRNP200-201ENST00000323853 NEPROQ6NW34 567 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 CASP12Q6UXS9 341 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 BBS12Q6ZW61 710 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 DHRSXQ8N5I4 330 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 PCDHB18PQ96TA0 734 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 EBNA1BP2Q99848 306 aaKnown RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 TDRKHQ9Y2W6 561 aaKnown RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 UBR1Q8IWV7 1749 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 PTPN3P26045 913 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 IL2P60568 153 aa11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 MRPS6P82932 125 aaKnown RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 PURAQ00577 322 aaKnown RBP11.05□□□□□ -0.64
SNRNP200-201ENST00000323853 COL9A3Q14050 684 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms