RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 TBL1YQ9BQ87 522 aa22.75■■□□□ 1.23
PNKP-201ENST00000322344 CDH19Q9H159 772 aa22.75■■□□□ 1.23
PNKP-201ENST00000322344 ANGPTL2Q9UKU9 493 aa22.75■■□□□ 1.23
PNKP-201ENST00000322344 DFFAO00273 331 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 CYBAP13498 195 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 POLD2P49005 469 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 BTBD8Q5XKL5 378 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 PKN3Q6P5Z2 889 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 OTOP3Q7RTS5 596 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 ARHGAP12Q8IWW6 846 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 TNS4Q8IZW8 715 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 SMOC2Q9H3U7 446 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 CAB39LQ9H9S4 337 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 GLOD4Q9HC38 313 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 ZFYVE28Q9HCC9 887 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 UBP1Q9NZI7 540 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 TLK1Q9UKI8 766 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 SKIP12755 728 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 TYMPP19971 482 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 CD52P31358 61 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 CCR1P32246 355 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 CPOXP36551 454 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 COPAP53621 1224 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 GEMP55040 296 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 ACTR3P61158 418 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 NKX3-2P78367 333 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 BLMHQ13867 455 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 FSCBQ5H9T9 825 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 CFAP157Q5JU67 520 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 ATG14Q6ZNE5 492 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 LRRC74BQ6ZQY2 392 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 OR10T2Q8NGX3 314 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 USP33Q8TEY7 942 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 PTCD2Q8WV60 388 aaKnown RBP22.74■■□□□ 1.23
PNKP-201ENST00000322344 CMTM5Q96DZ9 223 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 SIK2Q9H0K1 926 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 GPAMQ9HCL2 828 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 NMRK1Q9NWW6 199 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 DNAJB4Q9UDY4 337 aa22.74■■□□□ 1.23
PNKP-201ENST00000322344 E2F8A0AVK6 867 aa22.73■■□□□ 1.23
PNKP-201ENST00000322344 MATN3O15232 486 aa22.73■■□□□ 1.23
PNKP-201ENST00000322344 TBX10O75333 385 aa22.73■■□□□ 1.23
PNKP-201ENST00000322344 PRDX6P30041 224 aa22.73■■□□□ 1.23
PNKP-201ENST00000322344 THPOP40225 353 aa22.73■■□□□ 1.23
PNKP-201ENST00000322344 HK2P52789 917 aa22.73■■□□□ 1.23
PNKP-201ENST00000322344 SESN3P58005 492 aa22.73■■□□□ 1.23
PNKP-201ENST00000322344 IRF9Q00978 393 aa22.73■■□□□ 1.23
PNKP-201ENST00000322344 PAN2Q504Q3 1202 aaKnown RBP22.73■■□□□ 1.23
PNKP-201ENST00000322344 MANEALQ5VSG8 457 aa22.73■■□□□ 1.23
PNKP-201ENST00000322344 MFSD14CQ5VZR4 134 aa22.73■■□□□ 1.23
PNKP-201ENST00000322344 METTL21CQ5VZV1 264 aa22.73■■□□□ 1.23
PNKP-201ENST00000322344 TIGD7Q6NT04 549 aaPredicted RBP22.73■■□□□ 1.23
PNKP-201ENST00000322344 LRRTM3Q86VH5 581 aa22.73■■□□□ 1.23
PNKP-201ENST00000322344 ZC3HC1Q86WB0 502 aaKnown RBP22.73■■□□□ 1.23
PNKP-201ENST00000322344 IFNL1Q8IU54 200 aa22.73■■□□□ 1.23
PNKP-201ENST00000322344 PPFIBP2Q8ND30 876 aa22.73■■□□□ 1.23
PNKP-201ENST00000322344 MIEF2Q96C03 454 aa22.73■■□□□ 1.23
PNKP-201ENST00000322344 SLC7A8Q9UHI5 535 aa22.73■■□□□ 1.23
PNKP-201ENST00000322344 MAGED2Q9UNF1 606 aaPredicted RBP22.73■■□□□ 1.23
PNKP-201ENST00000322344 MGEA5O60502 916 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 PAGE1O75459 146 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 PGK1P00558 417 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 COL6A2P12110 1019 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 GMPRP36959 345 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 PPP2R5DQ14738 602 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 GRM3Q14832 879 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 DLG2Q15700 870 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 EPGNQ6UW88 154 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 RIPOR1Q6ZS17 1223 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 LRRC49Q8IUZ0 686 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 CNTN4Q8IWV2 1026 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 SUSD3Q96L08 255 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 MRM3Q9HC36 420 aaKnown RBP22.72■■□□□ 1.23
PNKP-201ENST00000322344 OXSMQ9NWU1 459 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 SLC39A10Q9ULF5 831 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 ARMC3Q5W041 872 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 POTEHQ6S545 545 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 ZYG11AQ6WRX3 759 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 RAPH1Q70E73 1250 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 SPATA2LQ8IUW3 424 aaPredicted RBP22.72■■□□□ 1.23
PNKP-201ENST00000322344 PPHLN1Q8NEY8 458 aaKnown RBP22.72■■□□□ 1.23
PNKP-201ENST00000322344 SCAMP5Q8TAC9 235 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 PANX3Q96QZ0 392 aa22.72■■□□□ 1.23
PNKP-201ENST00000322344 MAFKO60675 156 aa22.71■■□□□ 1.23
PNKP-201ENST00000322344 ABCG1P45844 678 aa22.71■■□□□ 1.23
PNKP-201ENST00000322344 SLC5A3P53794 718 aa22.71■■□□□ 1.23
PNKP-201ENST00000322344 INHBEP58166 350 aa22.71■■□□□ 1.23
PNKP-201ENST00000322344 TRIM68Q6AZZ1 485 aa22.71■■□□□ 1.23
PNKP-201ENST00000322344 ARHGAP36Q6ZRI8 547 aa22.71■■□□□ 1.23
PNKP-201ENST00000322344 MYLK4Q86YV6 388 aaPredicted RBP22.71■■□□□ 1.23
PNKP-201ENST00000322344 TMEM209Q96SK2 561 aa22.71■■□□□ 1.23
PNKP-201ENST00000322344 ENTPD7Q9NQZ7 604 aa22.71■■□□□ 1.23
PNKP-201ENST00000322344 FNIP2Q9P278 1114 aa22.71■■□□□ 1.23
PNKP-201ENST00000322344 CABYRO75952 493 aa22.7■■□□□ 1.23
PNKP-201ENST00000322344 NRG1Q02297 640 aaPredicted RBP22.7■■□□□ 1.23
PNKP-201ENST00000322344 SLC12A1Q13621 1099 aa22.7■■□□□ 1.23
PNKP-201ENST00000322344 USP10Q14694 798 aaKnown RBP22.7■■□□□ 1.23
PNKP-201ENST00000322344 C1orf146Q5VVC0 180 aa22.7■■□□□ 1.23
PNKP-201ENST00000322344 ZNF781Q8N8C0 355 aa22.7■■□□□ 1.23
PNKP-201ENST00000322344 SPATA22Q8NHS9 363 aa22.7■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms