RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 LRRC17Q8N6Y2 441 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 LRRC57Q8N9N7 239 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 SLC44A5Q8NCS7 719 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 CXorf21Q9HAI6 301 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 MTF2Q9Y483 593 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-201ENST00000322213 TCRBV9S1A1TA0A576 114 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 WDR27A2RRH5 827 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 LIASO43766 372 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 HUS1O60921 280 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 HLA-DRAP01903 254 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 LCP1P13796 627 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 ETS1P14921 441 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 PPIL2Q13356 520 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF829Q3KNS6 432 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-201ENST00000322213 DGKKQ5KSL6 1271 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 SLC9A4Q6AI14 798 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 PROSER1Q86XN7 944 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 GALNT6Q8NCL4 622 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 SYTL5Q8TDW5 730 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-201ENST00000322213 CLPTM1LQ96KA5 538 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 BBIP1A8MTZ0 92 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 UBAP1LF5GYI3 381 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 CASP4P49662 377 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 MAD2L1Q13257 205 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-201ENST00000322213 TMEM132DQ14C87 1099 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 SMU1Q2TAY7 513 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 KRT74Q7RTS7 529 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 NSUN4Q96CB9 384 aaKnown RBP7.16□□□□□ -1.26
SMC1A-201ENST00000322213 LRRC4CQ9HCJ2 640 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF624Q9P2J8 865 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF222Q9UK12 451 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 N6AMT1Q9Y5N5 214 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 LRRC55Q6ZSA7 311 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 OR6B3Q8NGW1 331 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 YME1L1Q96TA2 773 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 ANKHQ9HCJ1 492 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 A0A1B0GVG6 124 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 PRR5-ARHGAP8B1AHC4 643 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 AXIN1O15169 862 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 ARHGAP8P85298 464 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF302Q9NR11 478 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 SRP68Q9UHB9 627 aaKnown RBP7.16□□□□□ -1.26
SMC1A-201ENST00000322213 TMEM98Q9Y2Y6 226 aa7.16□□□□□ -1.26
SMC1A-201ENST00000322213 MRASO14807 208 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 KCNH1O95259 989 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 CRKP46108 304 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 LSAMPQ13449 338 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 DCAF15Q66K64 600 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 CYP4V2Q6ZWL3 525 aaPredicted RBP7.15□□□□□ -1.26
SMC1A-201ENST00000322213 STX12Q86Y82 276 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 ACTRT2Q8TDY3 377 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 Q96MT0 163 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 MBOAT7Q96N66 472 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 UQCC2Q9BRT2 126 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 DHX33Q9H6R0 707 aaKnown RBP7.15□□□□□ -1.26
SMC1A-201ENST00000322213 TOPORSQ9NS56 1045 aaPredicted RBP7.15□□□□□ -1.26
SMC1A-201ENST00000322213 TMEM9Q9P0T7 183 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 ACOT9Q9Y305 439 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF263O14978 683 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 CCNT2O60583 730 aaKnown RBP7.15□□□□□ -1.26
SMC1A-201ENST00000322213 MYCLP1P12525 358 aaPredicted RBP7.15□□□□□ -1.26
SMC1A-201ENST00000322213 PSME3P61289 254 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 TRIM32Q13049 653 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 KIZQ2M2Z5 673 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 WDR72Q3MJ13 1102 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 MZT2AQ6P582 158 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 SPIRE2Q8WWL2 714 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 MRPL57Q9BQC6 102 aaKnown RBP7.15□□□□□ -1.26
SMC1A-201ENST00000322213 NID2Q14112 1375 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 GRAP2O75791 330 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 PGK2P07205 417 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF37AP17032 561 aaPredicted RBP7.15□□□□□ -1.26
SMC1A-201ENST00000322213 ITIH1P19827 911 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 SCN1BQ07699 218 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 TIGD7Q6NT04 549 aaPredicted RBP7.15□□□□□ -1.26
SMC1A-201ENST00000322213 MRPL48Q96GC5 212 aaKnown RBP7.15□□□□□ -1.26
SMC1A-201ENST00000322213 ERVK-11Q9UQG0 969 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 DOT1LQ8TEK3 1739 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 PLXNA1Q9UIW2 1896 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 PRR36Q9H6K5 1346 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 UBE2Q2LH0YL09 131 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 SPTLC1O15269 473 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 ATF6P18850 670 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 STAT5AP42229 794 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 RGS4P49798 205 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 STAT5BP51692 787 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 KCTD8Q6ZWB6 473 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 PIF1Q9H611 641 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 BTG4Q9NY30 223 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 MTMR4Q9NYA4 1195 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 TRMT6Q9UJA5 497 aaKnown RBP7.15□□□□□ -1.26
SMC1A-201ENST00000322213 VAV3Q9UKW4 847 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 PATJQ8NI35 1801 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 PRR14LQ5THK1 2151 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 DNAJA2O60884 412 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 AKR1D1P51857 326 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 CSE1LP55060 971 aaKnown RBP7.15□□□□□ -1.26
SMC1A-201ENST00000322213 TPTEP56180 551 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 GNG2P59768 71 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 BMPR2Q13873 1038 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms