RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 NEDD8Q15843 81 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 CCDC153Q494R4 210 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 METTL21CQ5VZV1 264 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 EEF1DP3Q658K8 133 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 TMEM26Q6ZUK4 368 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 RPS27LQ71UM5 84 aaKnown RBP9.82□□□□□ -0.84
PTPRA-202ENST00000318266 CROCCP3Q8IVE0 287 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 TP53INP2Q8IXH6 220 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 OFCC1Q8IZS5 231 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 LZTR1Q8N653 840 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 DNAAF3Q8N9W5 541 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 RDM1Q8NG50 284 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 CLEC4CQ8WTT0 213 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 SREK1Q8WXA9 508 aaKnown RBP9.82□□□□□ -0.84
PTPRA-202ENST00000318266 MFSD3Q96ES6 412 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 ZNF597Q96LX8 424 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 LPIN3Q9BQK8 851 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 MRIQ9BWK5 157 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 OSBPL11Q9BXB4 747 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 MRPL4Q9BYD3 311 aaKnown RBP9.82□□□□□ -0.84
PTPRA-202ENST00000318266 ACE2Q9BYF1 805 aaPredicted RBP9.82□□□□□ -0.84
PTPRA-202ENST00000318266 RMI1Q9H9A7 625 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 IL1RL2Q9HB29 575 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 TMPRSS4Q9NRS4 437 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 SIX4Q9UIU6 781 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 TCAF2A6NFQ2 919 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 RNF103O00237 685 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 GRID2O43424 1007 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 ALDH1A2O94788 518 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 FUCA1P04066 466 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 PRKCBP05771 671 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 POLBP06746 335 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 ASNSP08243 561 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 UGT1A1P22309 533 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 UGT1A4P22310 534 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 UGT1A3P35503 534 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 UGT1A5P35504 534 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 HALP42357 657 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 C21orf59P57076 290 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 TXNL4AP83876 142 aaKnown RBP9.82□□□□□ -0.84
PTPRA-202ENST00000318266 NME3Q13232 169 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 SEMA5AQ13591 1074 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 SNRNP48Q6IEG0 339 aaKnown RBP9.82□□□□□ -0.84
PTPRA-202ENST00000318266 PMF1Q6P1K2 205 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 GPR180Q86V85 440 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 C1orf127Q8N9H9 656 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 URGCPQ8TCY9 931 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 FAM151AQ8WW52 585 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 GPRASP2Q96D09 838 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 COX4I2Q96KJ9 171 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 RPAP3Q9H6T3 665 aaPredicted RBP9.82□□□□□ -0.84
PTPRA-202ENST00000318266 TRPC7Q9HCX4 862 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 GTSE1Q9NYZ3 720 aa9.82□□□□□ -0.84
PTPRA-202ENST00000318266 FUOMA2VDF0 154 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 PRORSD1PA6NEY8 169 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 TMEM88BA6NKF7 163 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 YDJCA8MPS7 323 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 C9IYK1 514 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 TRIM38O00635 465 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 MSCO60682 206 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 PLA2G6O60733 806 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 TPH1P17752 444 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 NDST1P52848 882 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 PFKPQ01813 784 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 GSTM4Q03013 218 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 EEPD1Q7L9B9 569 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 CYGBQ8WWM9 190 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 PPP1R14BQ96C90 147 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 BIRC8Q96P09 236 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 VPS33BQ9H267 617 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 TSPYL2Q9H2G4 693 aaPredicted RBP9.81□□□□□ -0.84
PTPRA-202ENST00000318266 SOX17Q9H6I2 414 aaPredicted RBP9.81□□□□□ -0.84
PTPRA-202ENST00000318266 CXorf21Q9HAI6 301 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 ZBTB26Q9HCK0 441 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 IGSF9Q9P2J2 1179 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 CPSF3Q9UKF6 684 aaKnown RBP9.81□□□□□ -0.84
PTPRA-202ENST00000318266 SNX9Q9Y5X1 595 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 ADAM23O75077 832 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 SERPINB7O75635 380 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 HNRNPLP14866 589 aaKnown RBP eCLIP9.81□□□□□ -0.848e-8■■□□□ 13.5
PTPRA-202ENST00000318266 GRIA3P42263 894 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 KPNA1P52294 538 aaPredicted RBP9.81□□□□□ -0.84
PTPRA-202ENST00000318266 AP3M2P53677 418 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 OXCT1P55809 520 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 GNA12Q03113 381 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 TRIM25Q14258 630 aaKnown RBP9.81□□□□□ -0.84
PTPRA-202ENST00000318266 INSCQ1MX18 579 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 KIZQ2M2Z5 673 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 GOLGA7BQ2TAP0 167 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 AARS2Q5JTZ9 985 aaKnown RBP9.81□□□□□ -0.84
PTPRA-202ENST00000318266 LDLRAP1Q5SW96 308 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 STEAP4Q687X5 459 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 HMBOX1Q6NT76 420 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 CHSY3Q70JA7 882 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 SETD3Q86TU7 594 aaPredicted RBP9.81□□□□□ -0.84
PTPRA-202ENST00000318266 FAM131BQ86XD5 332 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 TRIM50Q86XT4 487 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 CENPSQ8N2Z9 138 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 CBR4Q8N4T8 237 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 CCDC185Q8N715 623 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms