RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 BBS2Q9BXC9 721 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 REXO4Q9GZR2 422 aaKnown RBP7.65□□□□□ -1.18
CDHR3-201ENST00000317716 ATAD3AQ9NVI7 634 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 SYBUQ9NX95 663 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 KANSL3Q9P2N6 904 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 FAM8A1Q9UBU6 413 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.65□□□□□ -1.18
CDHR3-201ENST00000317716 TSPAN16Q9UKR8 245 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 ST14Q9Y5Y6 855 aa7.65□□□□□ -1.18
CDHR3-201ENST00000317716 MYH1P12882 1939 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 MYH4Q9Y623 1939 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 TMEM88BA6NKF7 163 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 MAGEB2O15479 319 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 PLIN3O60664 434 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 CBFA2T3O75081 653 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 TGDSO95455 350 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 HSMCR30P0CW71 290 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 ALOX12P18054 663 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 RPL14P50914 215 aaKnown RBP7.65□□□□□ -1.19
CDHR3-201ENST00000317716 KPNA2P52292 529 aaKnown RBP7.65□□□□□ -1.19
CDHR3-201ENST00000317716 ADGRE1Q14246 886 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 LSM12Q3MHD2 195 aaKnown RBP7.65□□□□□ -1.19
CDHR3-201ENST00000317716 ARL13AQ5H913 290 aaPredicted RBP7.65□□□□□ -1.19
CDHR3-201ENST00000317716 PAGE2BQ5JRK9 111 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 TMEM214Q6NUQ4 689 aaKnown RBP7.65□□□□□ -1.19
CDHR3-201ENST00000317716 FOXR2Q6PJQ5 311 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 TAS2R42Q7RTR8 314 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 ZNF555Q8NEP9 628 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 LMO3Q8TAP4 145 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 SYTL5Q8TDW5 730 aaPredicted RBP7.65□□□□□ -1.19
CDHR3-201ENST00000317716 SMAD5Q99717 465 aaKnown RBP7.65□□□□□ -1.19
CDHR3-201ENST00000317716 THUMPD3Q9BV44 507 aaKnown RBP7.65□□□□□ -1.19
CDHR3-201ENST00000317716 YIPF2Q9BWQ6 316 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 TIMMDC1Q9NPL8 285 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 CDC14AQ9UNH5 594 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 ZNF232Q9UNY5 417 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 ACOT9Q9Y305 439 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 TMX2Q9Y320 296 aa7.65□□□□□ -1.19
CDHR3-201ENST00000317716 A0A1B0GTW7 788 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 NEMP2A6NFY4 417 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 EEF2KO00418 725 aaKnown RBP7.64□□□□□ -1.19
CDHR3-201ENST00000317716 KPNA4O00629 521 aaPredicted RBP7.64□□□□□ -1.19
CDHR3-201ENST00000317716 HDAC3O15379 428 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 TBC1D4O60343 1298 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 DDHD2O94830 711 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 HSPA1AP0DMV8 641 aaKnown RBP7.64□□□□□ -1.19
CDHR3-201ENST00000317716 HSPA1BP0DMV9 641 aaKnown RBP7.64□□□□□ -1.19
CDHR3-201ENST00000317716 FKBP1AP62942 108 aaKnown RBP7.64□□□□□ -1.19
CDHR3-201ENST00000317716 IRF9Q00978 393 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 MAP3K10Q02779 954 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 RBBP7Q16576 425 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 POTEHQ6S545 545 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 CHSY1Q86X52 802 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 NAT8LQ8N9F0 302 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 HTR3CQ8WXA8 447 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 NKD2Q969F2 451 aaPredicted RBP7.64□□□□□ -1.19
CDHR3-201ENST00000317716 CPB2Q96IY4 423 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 TBCDQ9BTW9 1192 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 GATA5Q9BWX5 397 aaPredicted RBP7.64□□□□□ -1.19
CDHR3-201ENST00000317716 CNGB3Q9NQW8 809 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 PNPLA3Q9NST1 481 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 COPG2Q9UBF2 871 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 XPR1Q9UBH6 696 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 VANGL2Q9ULK5 521 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 PPME1Q9Y570 386 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 U3KQV3 271 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 A8MU76 341 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 M0QYT0 321 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 METTL18O95568 372 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 APOA1P02647 267 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 C2P06681 752 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 ZNF182P17025 639 aaPredicted RBP7.64□□□□□ -1.19
CDHR3-201ENST00000317716 PTPN1P18031 435 aaKnown RBP7.64□□□□□ -1.19
CDHR3-201ENST00000317716 PCSK6P29122 969 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 GABRB2P47870 512 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 CCNG1P51959 295 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 NDST1P52848 882 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 HADHBP55084 474 aaKnown RBP7.64□□□□□ -1.19
CDHR3-201ENST00000317716 MYBPC2Q14324 1141 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 ATF7IP2Q5U623 682 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 RGMBQ6NW40 437 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 KCNMB4Q86W47 210 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 CROCCP3Q8IVE0 287 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 RAVER1Q8IY67 606 aaKnown RBP7.64□□□□□ -1.19
CDHR3-201ENST00000317716 SLC7A5P1Q8MH63 180 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 TMEM130Q8N3G9 435 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 DCBLD1Q8N8Z6 715 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 URGCPQ8TCY9 931 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 NDRG1Q92597 394 aaKnown RBP7.64□□□□□ -1.19
CDHR3-201ENST00000317716 ZNF516Q92618 1163 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 CAPNS2Q96L46 248 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 ZNF512Q96ME7 567 aaPredicted RBP7.64□□□□□ -1.19
CDHR3-201ENST00000317716 RNF157Q96PX1 679 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 AGAP2Q99490 1192 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 NT5C1AQ9BXI3 368 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 CDH19Q9H159 772 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 MIR1-1HGQ9H1L0 117 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 POMKQ9H5K3 350 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 ANKEF1Q9NU02 776 aa7.64□□□□□ -1.19
CDHR3-201ENST00000317716 HOXC10Q9NYD6 342 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms