RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 XPO1O14980 1071 aaKnown RBP19.43■□□□□ 0.7
RTN4-201ENST00000317610 PDGFRBP09619 1106 aa19.43■□□□□ 0.7
RTN4-201ENST00000317610 DNAJB1P25685 340 aa19.43■□□□□ 0.7
RTN4-201ENST00000317610 NPY2RP49146 381 aa19.43■□□□□ 0.7
RTN4-201ENST00000317610 PKNOX1P55347 436 aa19.43■□□□□ 0.7
RTN4-201ENST00000317610 ARHGAP1Q07960 439 aa19.43■□□□□ 0.7
RTN4-201ENST00000317610 MYLK3Q32MK0 819 aa19.43■□□□□ 0.7
RTN4-201ENST00000317610 DALRD3Q5D0E6 543 aaKnown RBP19.43■□□□□ 0.7
RTN4-201ENST00000317610 PDCD6IPQ8WUM4 868 aaKnown RBP19.43■□□□□ 0.7
RTN4-201ENST00000317610 CNBD2Q96M20 576 aa19.43■□□□□ 0.7
RTN4-201ENST00000317610 MLPHQ9BV36 600 aaPredicted RBP19.43■□□□□ 0.7
RTN4-201ENST00000317610 NUF2Q9BZD4 464 aa19.43■□□□□ 0.7
RTN4-201ENST00000317610 SENP6Q9GZR1 1112 aaPredicted RBP19.43■□□□□ 0.7
RTN4-201ENST00000317610 EFCAB1Q9HAE3 211 aa19.43■□□□□ 0.7
RTN4-201ENST00000317610 TARM1B6A8C7 271 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 FAM58BPP0C7Q3 252 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 CYP2C9P11712 490 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 LMO2P25791 158 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 NOS2P35228 1153 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 CCR10P46092 362 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 CDKL1Q00532 357 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 PPIDQ08752 370 aaKnown RBP19.42■□□□□ 0.7
RTN4-201ENST00000317610 GK3PQ14409 553 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 ZNF410Q86VK4 478 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 LSMEM2Q8N112 164 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 DNAAF3Q8N9W5 541 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 ZFP28Q8NHY6 868 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 SLC2A14Q8TDB8 520 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 STYXQ8WUJ0 223 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 C18orf25Q96B23 403 aaPredicted RBP19.42■□□□□ 0.7
RTN4-201ENST00000317610 MOCOSQ96EN8 888 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 KLHL32Q96NJ5 620 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 GBA3Q9H227 469 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 TASP1Q9H6P5 420 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 C20orf96Q9NUD7 363 aaPredicted RBP19.42■□□□□ 0.7
RTN4-201ENST00000317610 SNTG2Q9NY99 539 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 HSFX1Q9UBD0 423 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 PDCD11Q14690 1871 aaKnown RBP19.42■□□□□ 0.7
RTN4-201ENST00000317610 ENO3P13929 434 aaPredicted RBP19.42■□□□□ 0.7
RTN4-201ENST00000317610 GNL1P36915 607 aaPredicted RBP19.42■□□□□ 0.7
RTN4-201ENST00000317610 GRM3Q14832 879 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 TBC1D25Q3MII6 688 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 DCAF6Q58WW2 860 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 CERCAMQ5T4B2 595 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 TRPM4Q8TD43 1214 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 FAM149B1Q96BN6 582 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 CATSPER2Q96P56 530 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 GRIP2Q9C0E4 1043 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 IARS2Q9NSE4 1012 aaKnown RBP19.42■□□□□ 0.7
RTN4-201ENST00000317610 SBF1O95248 1867 aa19.42■□□□□ 0.7
RTN4-201ENST00000317610 BRCA1P38398 1863 aaKnown RBP19.41■□□□□ 0.7
RTN4-201ENST00000317610 H0YJX3 145 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 DDHD2O94830 711 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 CD68P34810 354 aaPredicted RBP19.41■□□□□ 0.7
RTN4-201ENST00000317610 KIZQ2M2Z5 673 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 TMEM198Q66K66 360 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 PDZD4Q76G19 769 aaPredicted RBP19.41■□□□□ 0.7
RTN4-201ENST00000317610 ZC3HC1Q86WB0 502 aaKnown RBP19.41■□□□□ 0.7
RTN4-201ENST00000317610 NDRG1Q92597 394 aaKnown RBP19.41■□□□□ 0.7
RTN4-201ENST00000317610 USP13Q92995 863 aaPredicted RBP19.41■□□□□ 0.7
RTN4-201ENST00000317610 PPP1R36Q96LQ0 422 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 NSMCE4AQ9NXX6 385 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 TLK1Q9UKI8 766 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 SLC39A10Q9ULF5 831 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 G3BP2Q9UN86 482 aaKnown RBP19.41■□□□□ 0.7
RTN4-201ENST00000317610 TCAF2A6NFQ2 919 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 NCAM2O15394 837 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 CFLARO15519 480 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 ZBTB24O43167 697 aaPredicted RBP19.41■□□□□ 0.7
RTN4-201ENST00000317610 HSPA1AP0DMV8 641 aaKnown RBP19.41■□□□□ 0.7
RTN4-201ENST00000317610 HSPA1BP0DMV9 641 aaKnown RBP19.41■□□□□ 0.7
RTN4-201ENST00000317610 TKTP29401 623 aaKnown RBP19.41■□□□□ 0.7
RTN4-201ENST00000317610 MSX2P35548 267 aaPredicted RBP19.41■□□□□ 0.7
RTN4-201ENST00000317610 PSMD8P48556 350 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 ADIGQ0VDE8 80 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 ART3Q13508 389 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 ADRM1Q16186 407 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 C6orf52Q5T4I8 152 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 GADL1Q6ZQY3 521 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 PIGZQ86VD9 579 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 ADAM32Q8TC27 787 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 MAELQ96JY0 434 aaKnown RBP19.41■□□□□ 0.7
RTN4-201ENST00000317610 SLC2A13Q96QE2 648 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 RHOJQ9H4E5 214 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 APPL1Q9UKG1 709 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 GJD2Q9UKL4 321 aa19.41■□□□□ 0.7
RTN4-201ENST00000317610 COL6A2P12110 1019 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 ERCC2P18074 760 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 NAGLUP54802 743 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 INHBCP55103 352 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 SEMA3BQ13214 749 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 ALKAL1Q6UXT8 129 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 LIMS2Q7Z4I7 341 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 SLC9A7Q96T83 725 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 PRPF18Q99633 342 aaKnown RBP19.4■□□□□ 0.7
RTN4-201ENST00000317610 DNAI2Q9GZS0 605 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 BRD8Q9H0E9 1235 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 CHRAC1Q9NRG0 131 aa19.4■□□□□ 0.7
RTN4-201ENST00000317610 UTP6Q9NYH9 597 aaKnown RBP19.4■□□□□ 0.7
RTN4-201ENST00000317610 TRHDEQ9UKU6 1024 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms