RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 CDH15P55291 814 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 OLR1P78380 273 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 OTUD4Q01804 1114 aaKnown RBP6.77□□□□□ -1.33
ZNF540-201ENST00000316433 TRAP1Q12931 704 aaKnown RBP6.77□□□□□ -1.33
ZNF540-201ENST00000316433 ZNF211Q13398 564 aaPredicted RBP6.77□□□□□ -1.33
ZNF540-201ENST00000316433 ADGRE1Q14246 886 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 UBE2SQ16763 222 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 ARHGAP44Q17R89 818 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 FAM47CQ5HY64 1035 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 TIFABQ6ZNK6 161 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 BTLAQ7Z6A9 289 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 PRPF39Q86UA1 669 aaKnown RBP6.77□□□□□ -1.33
ZNF540-201ENST00000316433 ZNF354CQ86Y25 554 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 GATAD2AQ86YP4 633 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 LEMD2Q8NC56 503 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 PDPRQ8NCN5 879 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 FLCNQ8NFG4 579 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 FRS2Q8WU20 508 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 SH3KBP1Q96B97 665 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 CCDC124Q96CT7 223 aaKnown RBP6.77□□□□□ -1.33
ZNF540-201ENST00000316433 NLRP4Q96MN2 994 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 KREMEN1Q96MU8 473 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 DEPDC7Q96QD5 511 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 ZNF341Q9BYN7 854 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 RHOBTB2Q9BYZ6 727 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 FAM96AQ9H5X1 160 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 FANCFQ9NPI8 374 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 DIABLOQ9NR28 239 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 PPARGC1AQ9UBK2 798 aaKnown RBP6.77□□□□□ -1.33
ZNF540-201ENST00000316433 POMPQ9Y244 141 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 CAB39Q9Y376 341 aaPredicted RBP6.77□□□□□ -1.33
ZNF540-201ENST00000316433 TESMINQ9Y4I5 508 aa6.77□□□□□ -1.33
ZNF540-201ENST00000316433 TRAV6A0A075B6T7 132 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 POC1B-GALNT4F8VUJ3 575 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 FOXN3O00409 490 aaPredicted RBP6.76□□□□□ -1.33
ZNF540-201ENST00000316433 GCATO75600 419 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 ENDOD1O94919 500 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 GCNT3O95395 438 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 STAU1O95793 577 aaKnown RBP6.76□□□□□ -1.33
ZNF540-201ENST00000316433 BCL10O95999 233 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 FTLP02792 175 aaPredicted RBP6.76□□□□□ -1.33
ZNF540-201ENST00000316433 MCF2P10911 925 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 GYS1P13807 737 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 KRT15P19012 456 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 RRM1P23921 792 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 HNF1BP35680 557 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 PSMC6P62333 389 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 CARTPTQ16568 116 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 ABCB5Q2M3G0 1257 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 C5orf22Q49AR2 442 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 RSBN1Q5VWQ0 802 aaPredicted RBP6.76□□□□□ -1.33
ZNF540-201ENST00000316433 PGM2L1Q6PCE3 622 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 ZNF704Q6ZNC4 412 aaPredicted RBP6.76□□□□□ -1.33
ZNF540-201ENST00000316433 TMEM26Q6ZUK4 368 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 HAUS6Q7Z4H7 955 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 ZC3H7AQ8IWR0 971 aaKnown RBP6.76□□□□□ -1.33
ZNF540-201ENST00000316433 UNC45BQ8IWX7 931 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 RHOT1Q8IXI2 618 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 FAM178BQ8IXR5 827 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 CADM2Q8N3J6 435 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 CERS5Q8N5B7 392 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 PJA1Q8NG27 643 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 SLC35B2Q8TB61 432 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 CHURC1Q8WUH1 139 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 LRRC39Q96DD0 335 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 ZNF560Q96MR9 790 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 MCMBPQ9BTE3 642 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 WDR12Q9GZL7 423 aaKnown RBP6.76□□□□□ -1.33
ZNF540-201ENST00000316433 TMEM117Q9H0C3 514 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 MANSC1Q9H8J5 431 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 HMG20AQ9NP66 347 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 TMEM9Q9P0T7 183 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 FAM198AQ9UFP1 575 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 MKL2Q9ULH7 1088 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 MAGEB16A2A368 324 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 WTIPA6NIX2 430 aaPredicted RBP6.76□□□□□ -1.33
ZNF540-201ENST00000316433 C12orf71A8MTZ7 269 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 PPEF1O14829 653 aaPredicted RBP6.76□□□□□ -1.33
ZNF540-201ENST00000316433 AURKAO14965 403 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 PI15O43692 258 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 FAM189A1O60320 539 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 SORBS2O94875 1100 aaKnown RBP6.76□□□□□ -1.33
ZNF540-201ENST00000316433 STBD1O95210 358 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 MYL4P12829 197 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 ACO1P21399 889 aaKnown RBP6.76□□□□□ -1.33
ZNF540-201ENST00000316433 HSPA1LP34931 641 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 HSD17B2P37059 387 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 OPRL1P41146 370 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 EIF3EP60228 445 aaKnown RBP6.76□□□□□ -1.33
ZNF540-201ENST00000316433 UBXN2AP68543 259 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 SLC25A3Q00325 362 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 SELPLGQ14242 412 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 TAF5Q15542 800 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 DLG2Q15700 870 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 C4orf46Q504U0 113 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 KRT80Q6KB66 452 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 FKBP9P1Q75LS8 142 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 ARCQ7LC44 396 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 TPH2Q8IWU9 490 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 SAMD11Q96NU1 681 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms