RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 IRF1P10914 325 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 NFKB1P19838 968 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 CCR1P32246 355 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 VHLP40337 213 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 NR2C2P49116 596 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 EPHB1P54762 984 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 DEFB103AP81534 67 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 RAP1GAP2Q684P5 730 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 RNF135Q8IUD6 432 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 NUP93Q8N1F7 819 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 SLC43A3Q8NBI5 491 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 ST13P5Q8NFI4 369 aaPredicted RBP7.76□□□□□ -1.17
TRIM55-202ENST00000315962 AGR3Q8TD06 166 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 INPP5DQ92835 1189 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 PABPC5Q96DU9 382 aaKnown RBP7.76□□□□□ -1.17
TRIM55-202ENST00000315962 MOCOSQ96EN8 888 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 PAWRQ96IZ0 340 aaKnown RBP7.76□□□□□ -1.17
TRIM55-202ENST00000315962 ZNF512Q96ME7 567 aaPredicted RBP7.76□□□□□ -1.17
TRIM55-202ENST00000315962 TSPAN18Q96SJ8 248 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 CYP2S1Q96SQ9 504 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 AGAP2Q99490 1192 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 OCEL1Q9H607 264 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 DCLRE1BQ9H816 532 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 KCNK13Q9HB14 408 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 CHRAC1Q9NRG0 131 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 SYBUQ9NX95 663 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 G3BP2Q9UN86 482 aaKnown RBP7.76□□□□□ -1.17
TRIM55-202ENST00000315962 PHF24Q9UPV7 400 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 HS3ST4Q9Y661 456 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 THSD7BQ9C0I4 1608 aa7.76□□□□□ -1.17
TRIM55-202ENST00000315962 hCG_2014768A0A024R1R8 64 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 TRIM49D1C9J1S8 452 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 CHADO15335 359 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 GCATO75600 419 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 LYPLA1O75608 230 aaPredicted RBP7.75□□□□□ -1.17
TRIM55-202ENST00000315962 VNN2O95498 520 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 ZFXP17010 805 aaPredicted RBP7.75□□□□□ -1.17
TRIM55-202ENST00000315962 CD68P34810 354 aaPredicted RBP7.75□□□□□ -1.17
TRIM55-202ENST00000315962 PHBP35232 272 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 CHRNA4P43681 627 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 PDK1Q15118 436 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 RASA2Q15283 850 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 ZNF276Q8N554 614 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 CNTD1Q8N815 330 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 RBM15BQ8NDT2 890 aaKnown RBP7.75□□□□□ -1.17
TRIM55-202ENST00000315962 IPMKQ8NFU5 416 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 DCAKDQ8WVC6 231 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 SIGLEC10Q96LC7 697 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 PPP1R36Q96LQ0 422 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 RILPQ96NA2 401 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 TTC25Q96NG3 672 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 EPAS1Q99814 870 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 TSEN34Q9BSV6 310 aaKnown RBP7.75□□□□□ -1.17
TRIM55-202ENST00000315962 SLC39A8Q9C0K1 460 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 C20orf27Q9GZN8 174 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 ACSS3Q9H6R3 686 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 CYLDQ9NQC7 956 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 ABCC13Q9NSE7 274 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 TMEM39AQ9NV64 488 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 STOML1Q9UBI4 398 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 PPM1HQ9ULR3 514 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 SMG5Q9UPR3 1016 aaKnown RBP7.75□□□□□ -1.17
TRIM55-202ENST00000315962 PCDHB5Q9Y5E4 795 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 SLC12A8A0AV02 714 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 ARHGAP42A6NI28 874 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 J3KR12 359 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 CCL22O00626 93 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 IRAK2O43187 625 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 CCDC22O60826 627 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 WFS1O76024 890 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 SNUPNO95149 360 aaKnown RBP7.75□□□□□ -1.17
TRIM55-202ENST00000315962 GARSP41250 739 aaKnown RBP7.75□□□□□ -1.17
TRIM55-202ENST00000315962 TMPRSS15P98073 1019 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 POU6F1Q14863 301 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 MAPRE1Q15691 268 aaKnown RBP7.75□□□□□ -1.17
TRIM55-202ENST00000315962 CFAP157Q5JU67 520 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 PIK3R6Q5UE93 754 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 LPCAT4Q643R3 524 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 C16orf46Q6P387 395 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 SLC39A5Q6ZMH5 540 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 ARCQ7LC44 396 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 BNIPLQ7Z465 357 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 PTCD3Q96EY7 689 aaKnown RBP7.75□□□□□ -1.17
TRIM55-202ENST00000315962 NSL1Q96IY1 281 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 TUBGCP5Q96RT8 1024 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 SH3GL3Q99963 347 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 GORASP1Q9BQQ3 440 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 TRIM4Q9C037 500 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 BRD8Q9H0E9 1235 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 PCMTD2Q9NV79 361 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 RPS6KL1Q9Y6S9 549 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 A0A0U1RQS6 177 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 MTMR11A4FU01 709 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 E9PAM4 449 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 TXNDC9O14530 226 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 BUD23O43709 281 aaKnown RBP7.75□□□□□ -1.17
TRIM55-202ENST00000315962 HAPLN1P10915 354 aaPredicted RBP7.75□□□□□ -1.17
TRIM55-202ENST00000315962 ATF6P18850 670 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 YWHAQP27348 245 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 MRPS35P82673 323 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms