RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 DFFAO00273 331 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 FGF10O15520 208 aaPredicted RBP8.04□□□□□ -1.12
CDC42-201ENST00000315554 SMAD6O43541 496 aaKnown RBP8.04□□□□□ -1.12
CDC42-201ENST00000315554 TIMM44O43615 452 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 NRDCO43847 1150 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 PALMO75781 387 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 FTCDO95954 541 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 ASLP04424 464 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 KRT7P08729 469 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 TDGF1P13385 188 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 KDELR1P24390 212 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 IL4RP24394 825 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 MLLT3P42568 568 aaPredicted RBP8.04□□□□□ -1.12
CDC42-201ENST00000315554 SLC1A1P43005 524 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 PLK1P53350 603 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 HADHBP55084 474 aaKnown RBP8.04□□□□□ -1.12
CDC42-201ENST00000315554 OXCT1P55809 520 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 COPS2P61201 443 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 ST8SIA6P61647 398 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 SRSF5Q13243 272 aaKnown RBP8.04□□□□□ -1.12
CDC42-201ENST00000315554 SLC12A1Q13621 1099 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 POLD3Q15054 466 aaPredicted RBP8.04□□□□□ -1.12
CDC42-201ENST00000315554 ACCSLQ4AC99 568 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 FAM182AQ5T1J6 154 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 C11orf63Q6NUN7 778 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 ARHGAP36Q6ZRI8 547 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 TRMT11Q7Z4G4 463 aaKnown RBP8.04□□□□□ -1.12
CDC42-201ENST00000315554 PSTKQ8IV42 348 aaKnown RBP8.04□□□□□ -1.12
CDC42-201ENST00000315554 RHOT1Q8IXI2 618 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 PGBD3Q8N328 593 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 TSC1Q92574 1164 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 GABRG3Q99928 467 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 SLC39A8Q9C0K1 460 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 CD93Q9NPY3 652 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 LCMT1Q9UIC8 334 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 SLC25A13Q9UJS0 675 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 PACSIN2Q9UNF0 486 aaPredicted RBP8.04□□□□□ -1.12
CDC42-201ENST00000315554 PPP2R2CQ9Y2T4 447 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 FCF1Q9Y324 198 aaKnown RBP8.04□□□□□ -1.12
CDC42-201ENST00000315554 R4GN57 208 aa8.04□□□□□ -1.12
CDC42-201ENST00000315554 MUC22E2RYF6 1773 aaPredicted RBP8.03□□□□□ -1.12
CDC42-201ENST00000315554 CACNA1IQ9P0X4 2223 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 C3orf70A6NLC5 250 aaPredicted RBP8.03□□□□□ -1.12
CDC42-201ENST00000315554 WASH4PA8MWX3 477 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 J3KR12 359 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 DCLK1O15075 740 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 MFSD11O43934 449 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 SYNCRIPO60506 623 aaKnown RBP8.03□□□□□ -1.12
CDC42-201ENST00000315554 SIN3BO75182 1162 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 ZMPSTE24O75844 475 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 APBB3O95704 486 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 CCDC175P0C221 793 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 SRCP12931 536 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 GABRG2P18507 467 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 NDUFV2P19404 249 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 HCAR3P49019 387 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 PAPOLAP51003 745 aaKnown RBP8.03□□□□□ -1.12
CDC42-201ENST00000315554 DGKEP52429 567 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 DYNLT1P63172 113 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 ARF5P84085 180 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 STARD3Q14849 445 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 DLG2Q15700 870 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 ODF2Q5BJF6 829 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 ANKRD20A8PQ5CZ79 823 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 TMCO3Q6UWJ1 677 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 MFSD7Q6UXD7 560 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 KIAA1324Q6UXG2 1013 aaKnown RBP8.03□□□□□ -1.12
CDC42-201ENST00000315554 RFX6Q8HWS3 928 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 ARHGAP12Q8IWW6 846 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 UMODL1-AS1Q8N2C9 162 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 STK40Q8N2I9 435 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 FRMD1Q8N878 549 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 LRRC57Q8N9N7 239 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 DCAF4L2Q8NA75 395 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 ATP11CQ8NB49 1132 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 MDGA1Q8NFP4 955 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 PCDH19Q8TAB3 1148 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 KIAA1524Q8TCG1 905 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 RLN3Q8WXF3 142 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 MRRFQ96E11 262 aaKnown RBP8.03□□□□□ -1.12
CDC42-201ENST00000315554 IER2Q9BTL4 223 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 C2orf49Q9BVC5 232 aaPredicted RBP8.03□□□□□ -1.12
CDC42-201ENST00000315554 MAGEH1Q9H213 219 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 TNKS2Q9H2K2 1166 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 TMEM245Q9H330 911 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 LRRC19Q9H756 370 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 POLMQ9NP87 494 aaPredicted RBP8.03□□□□□ -1.12
CDC42-201ENST00000315554 PRSS16Q9NQE7 514 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 HCN4Q9Y3Q4 1203 aa8.03□□□□□ -1.12
CDC42-201ENST00000315554 DOCK4Q8N1I0 1966 aa8.02□□□□□ -1.12
CDC42-201ENST00000315554 AXIN1O15169 862 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 PSTPIP1O43586 416 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 KDELR3O43731 214 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 CD160O95971 181 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 SRPRAP08240 638 aaKnown RBP8.02□□□□□ -1.13
CDC42-201ENST00000315554 KRT10P13645 584 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 HTR7P34969 479 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 DEKP35659 375 aaKnown RBP8.02□□□□□ -1.13
CDC42-201ENST00000315554 ETFBP38117 255 aa8.02□□□□□ -1.13
CDC42-201ENST00000315554 SULT2A1Q06520 285 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms