RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 PTPN3P26045 913 aa16.46■□□□□ 0.23
TUBB3-201ENST00000315491 CD70P32970 193 aa16.46■□□□□ 0.23
TUBB3-201ENST00000315491 RPL22P35268 128 aaKnown RBP16.46■□□□□ 0.23
TUBB3-201ENST00000315491 VPS41P49754 854 aa16.46■□□□□ 0.23
TUBB3-201ENST00000315491 NUMBP49757 651 aa16.46■□□□□ 0.23
TUBB3-201ENST00000315491 TNK2Q07912 1038 aa16.46■□□□□ 0.23
TUBB3-201ENST00000315491 FAM182AQ5T1J6 154 aa16.46■□□□□ 0.23
TUBB3-201ENST00000315491 CPA6Q8N4T0 437 aa16.46■□□□□ 0.23
TUBB3-201ENST00000315491 CCDC110Q8TBZ0 833 aa16.46■□□□□ 0.23
TUBB3-201ENST00000315491 MAML1Q92585 1016 aa16.46■□□□□ 0.23
TUBB3-201ENST00000315491 FATE1Q969F0 183 aa16.46■□□□□ 0.23
TUBB3-201ENST00000315491 ALG14Q96F25 216 aa16.46■□□□□ 0.23
TUBB3-201ENST00000315491 LMLNQ96KR4 655 aa16.46■□□□□ 0.23
TUBB3-201ENST00000315491 XPO6Q96QU8 1125 aaKnown RBP16.46■□□□□ 0.23
TUBB3-201ENST00000315491 SLC2A11Q9BYW1 496 aa16.46■□□□□ 0.23
TUBB3-201ENST00000315491 TRIM31Q9BZY9 425 aa16.46■□□□□ 0.23
TUBB3-201ENST00000315491 EPB41L5Q9HCM4 733 aa16.46■□□□□ 0.23
TUBB3-201ENST00000315491 VPS18Q9P253 973 aa16.46■□□□□ 0.23
TUBB3-201ENST00000315491 VPS28Q9UK41 221 aa16.46■□□□□ 0.23
TUBB3-201ENST00000315491 BRWD1Q9NSI6 2320 aa16.46■□□□□ 0.23
TUBB3-201ENST00000315491 KIF26AQ9ULI4 1882 aaPredicted RBP16.46■□□□□ 0.23
TUBB3-201ENST00000315491 A0A0A0MRY4 1105 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 BHMG1C9JSJ3 638 aaPredicted RBP16.46■□□□□ 0.22
TUBB3-201ENST00000315491 CACNG3O60359 315 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 PEX11BO96011 259 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 HLA-FP30511 346 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 IFI35P80217 286 aaPredicted RBP16.46■□□□□ 0.22
TUBB3-201ENST00000315491 ZBTB17Q13105 803 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 NR1H3Q13133 447 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 SLC12A1Q13621 1099 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 RUNX3Q13761 415 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 DUPD1Q68J44 220 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 PTCRAQ6ISU1 281 aaPredicted RBP16.46■□□□□ 0.22
TUBB3-201ENST00000315491 PACS2Q86VP3 889 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 NAT16Q8N8M0 369 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 NSMCE1Q8WV22 266 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 SPATA13Q96N96 652 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 VAT1Q99536 393 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 CEP41Q9BYV8 373 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 DPH5Q9H2P9 285 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 ACBD3Q9H3P7 528 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 PDFQ9HBH1 243 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 ABCB8Q9NUT2 735 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 PAK5Q9P286 719 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 HPCAL4Q9UM19 191 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 SNX24Q9Y343 169 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 REV3LO60673 3130 aa16.46■□□□□ 0.22
TUBB3-201ENST00000315491 NYNRINQ9P2P1 1898 aaKnown RBP16.45■□□□□ 0.22
TUBB3-201ENST00000315491 OTOL1A6NHN0 477 aaPredicted RBP16.45■□□□□ 0.22
TUBB3-201ENST00000315491 CBX4O00257 560 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 JCHAINP01591 159 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 CCNB1P14635 433 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 GLDCP23378 1020 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 ADCY8P40145 1251 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 PLK1P53350 603 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 GPS1Q13098 491 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 PUS10Q3MIT2 529 aaKnown RBP16.45■□□□□ 0.22
TUBB3-201ENST00000315491 TEX44Q53QW1 395 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 ANKRD20A2Q5SQ80 823 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 ANKRD20A1Q5TYW2 823 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 ANKRD20A3Q5VUR7 823 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 ASTLQ6HA08 431 aaPredicted RBP16.45■□□□□ 0.22
TUBB3-201ENST00000315491 IFT20Q8IY31 132 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 APCDD1Q8J025 514 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 ZNF567Q8N184 647 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 DCAF4L2Q8NA75 395 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 USP33Q8TEY7 942 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 PNKPQ96T60 521 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 GDF3Q9NR23 364 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 KLHL8Q9P2G9 620 aaPredicted RBP16.45■□□□□ 0.22
TUBB3-201ENST00000315491 GGA2Q9UJY4 613 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 FBXO10Q9UK96 956 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 NUP205Q92621 2012 aa16.45■□□□□ 0.22
TUBB3-201ENST00000315491 ESYT3A0FGR9 886 aa16.44■□□□□ 0.22
TUBB3-201ENST00000315491 SNAP91O60641 907 aa16.44■□□□□ 0.22
TUBB3-201ENST00000315491 OPHN1O60890 802 aa16.44■□□□□ 0.22
TUBB3-201ENST00000315491 PABPC1P11940 636 aaKnown RBP16.44■□□□□ 0.22
TUBB3-201ENST00000315491 HNRNPDQ14103 355 aaKnown RBP16.44■□□□□ 0.22
TUBB3-201ENST00000315491 GAB4Q2WGN9 574 aa16.44■□□□□ 0.22
TUBB3-201ENST00000315491 PLEKHG6Q3KR16 790 aa16.44■□□□□ 0.22
TUBB3-201ENST00000315491 SWT1Q5T5J6 900 aaKnown RBP16.44■□□□□ 0.22
TUBB3-201ENST00000315491 C4orf22Q6V702 233 aa16.44■□□□□ 0.22
TUBB3-201ENST00000315491 PID1Q7Z2X4 250 aa16.44■□□□□ 0.22
TUBB3-201ENST00000315491 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.44■□□□□ 0.22
TUBB3-201ENST00000315491 MAFAQ8NHW3 353 aaPredicted RBP16.44■□□□□ 0.22
TUBB3-201ENST00000315491 CASKIN2Q8WXE0 1202 aa16.44■□□□□ 0.22
TUBB3-201ENST00000315491 SEC14L1Q92503 715 aa16.44■□□□□ 0.22
TUBB3-201ENST00000315491 RUBCNQ92622 972 aa16.44■□□□□ 0.22
TUBB3-201ENST00000315491 LRRC45Q96CN5 670 aa16.44■□□□□ 0.22
TUBB3-201ENST00000315491 ZNF599Q96NL3 588 aa16.44■□□□□ 0.22
TUBB3-201ENST00000315491 IL12RB2Q99665 862 aa16.44■□□□□ 0.22
TUBB3-201ENST00000315491 FAM107BQ9H098 131 aa16.44■□□□□ 0.22
TUBB3-201ENST00000315491 MED4Q9NPJ6 270 aa16.44■□□□□ 0.22
TUBB3-201ENST00000315491 DNAJC17Q9NVM6 304 aaKnown RBP16.44■□□□□ 0.22
TUBB3-201ENST00000315491 GTSE1Q9NYZ3 720 aa16.44■□□□□ 0.22
TUBB3-201ENST00000315491 TRHDEQ9UKU6 1024 aa16.44■□□□□ 0.22
TUBB3-201ENST00000315491 INTS6Q9UL03 887 aaKnown RBP16.44■□□□□ 0.22
TUBB3-201ENST00000315491 FAM50BQ9Y247 325 aa16.44■□□□□ 0.22
TUBB3-201ENST00000315491 ZMPSTE24O75844 475 aa16.43■□□□□ 0.22
TUBB3-201ENST00000315491 IVDP26440 423 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms