RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 CIR1Q86X95 450 aaPredicted RBP18.69■□□□□ 0.58
CCDC43-201ENST00000315286 ARMC2Q8NEN0 867 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 ZNF778Q96MU6 729 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 AGAP2Q99490 1192 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 CLSTN3Q9BQT9 956 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 TMEM39AQ9NV64 488 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 TXNDC16Q9P2K2 825 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 ZNF212Q9UDV6 495 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 COL4A6Q14031 1691 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 TPP1O14773 563 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 SEC24AO95486 1093 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 BGNP21810 368 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 GP5P40197 560 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 TUFMP49411 452 aaKnown RBP18.69■□□□□ 0.58
CCDC43-201ENST00000315286 GEMP55040 296 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 HSP90AA5PQ58FG0 334 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 TEDDM1Q5T9Z0 273 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 DENND5AQ6IQ26 1287 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 PPM1EQ8WY54 764 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 RPRD1AQ96P16 312 aaPredicted RBP18.69■□□□□ 0.58
CCDC43-201ENST00000315286 CPNE1Q99829 537 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 FICDQ9BVA6 458 aa18.69■□□□□ 0.58
CCDC43-201ENST00000315286 CCDC78A2IDD5 438 aa18.68■□□□□ 0.58
CCDC43-201ENST00000315286 PMPCBO75439 489 aa18.68■□□□□ 0.58
CCDC43-201ENST00000315286 NEBLO76041 1014 aa18.68■□□□□ 0.58
CCDC43-201ENST00000315286 F7P08709 466 aaPredicted RBP18.68■□□□□ 0.58
CCDC43-201ENST00000315286 NEFHP12036 1026 aa18.68■□□□□ 0.58
CCDC43-201ENST00000315286 ADRA1AP35348 466 aa18.68■□□□□ 0.58
CCDC43-201ENST00000315286 HNRNPDQ14103 355 aaKnown RBP18.68■□□□□ 0.58
CCDC43-201ENST00000315286 FAM133BQ5BKY9 247 aaKnown RBP18.68■□□□□ 0.58
CCDC43-201ENST00000315286 SPOUT1Q5T280 376 aaKnown RBP18.68■□□□□ 0.58
CCDC43-201ENST00000315286 GRTP1Q5TC63 336 aa18.68■□□□□ 0.58
CCDC43-201ENST00000315286 C1orf53Q5VUE5 145 aa18.68■□□□□ 0.58
CCDC43-201ENST00000315286 FITM2Q8N6M3 262 aa18.68■□□□□ 0.58
CCDC43-201ENST00000315286 MECRQ9BV79 373 aa18.68■□□□□ 0.58
CCDC43-201ENST00000315286 KIFC1Q9BW19 673 aa18.68■□□□□ 0.58
CCDC43-201ENST00000315286 DONSONQ9NYP3 566 aa18.68■□□□□ 0.58
CCDC43-201ENST00000315286 UBOX5O94941 541 aa18.67■□□□□ 0.58
CCDC43-201ENST00000315286 DNAJB2P25686 324 aa18.67■□□□□ 0.58
CCDC43-201ENST00000315286 PDE1BQ01064 536 aa18.67■□□□□ 0.58
CCDC43-201ENST00000315286 SLC10A7Q0GE19 358 aa18.67■□□□□ 0.58
CCDC43-201ENST00000315286 FAM117BQ6P1L5 589 aa18.67■□□□□ 0.58
CCDC43-201ENST00000315286 ACMSDQ8TDX5 336 aa18.67■□□□□ 0.58
CCDC43-201ENST00000315286 TOP1MTQ969P6 601 aa18.67■□□□□ 0.58
CCDC43-201ENST00000315286 PSMG2Q969U7 264 aa18.67■□□□□ 0.58
CCDC43-201ENST00000315286 AZIN2Q96A70 460 aa18.67■□□□□ 0.58
CCDC43-201ENST00000315286 ZNF512Q96ME7 567 aaPredicted RBP18.67■□□□□ 0.58
CCDC43-201ENST00000315286 KLHL5Q96PQ7 755 aa18.67■□□□□ 0.58
CCDC43-201ENST00000315286 C20orf96Q9NUD7 363 aaPredicted RBP18.67■□□□□ 0.58
CCDC43-201ENST00000315286 HAUS2Q9NVX0 235 aa18.67■□□□□ 0.58
CCDC43-201ENST00000315286 AFF4Q9UHB7 1163 aaKnown RBP18.67■□□□□ 0.58
CCDC43-201ENST00000315286 HGSO14964 777 aaPredicted RBP18.67■□□□□ 0.58
CCDC43-201ENST00000315286 ATP5C1P36542 298 aaKnown RBP18.67■□□□□ 0.58
CCDC43-201ENST00000315286 RENBPP51606 427 aa18.67■□□□□ 0.58
CCDC43-201ENST00000315286 KPNA1P52294 538 aaPredicted RBP18.67■□□□□ 0.58
CCDC43-201ENST00000315286 PDE1CQ14123 709 aaPredicted RBP18.67■□□□□ 0.58
CCDC43-201ENST00000315286 KDELC2Q7Z4H8 507 aa18.67■□□□□ 0.58
CCDC43-201ENST00000315286 STRA8Q7Z7C7 330 aa18.67■□□□□ 0.58
CCDC43-201ENST00000315286 KCNMB4Q86W47 210 aa18.67■□□□□ 0.58
CCDC43-201ENST00000315286 MRGPRX2Q96LB1 330 aa18.67■□□□□ 0.58
CCDC43-201ENST00000315286 TSSK1BQ9BXA7 367 aa18.67■□□□□ 0.58
CCDC43-201ENST00000315286 RASSF4Q9H2L5 321 aa18.67■□□□□ 0.58
CCDC43-201ENST00000315286 DNMT3LQ9UJW3 386 aa18.67■□□□□ 0.58
CCDC43-201ENST00000315286 SLC12A4Q9UP95 1085 aa18.67■□□□□ 0.58
CCDC43-201ENST00000315286 HBS1LQ9Y450 684 aaKnown RBP18.67■□□□□ 0.58
CCDC43-201ENST00000315286 ZNF840PA6NDX5 716 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 GJB5O95377 273 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 SOD2P04179 222 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 HMGA1P17096 107 aaKnown RBP18.66■□□□□ 0.58
CCDC43-201ENST00000315286 TACR2P21452 398 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 OVGP1Q12889 678 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 POU6F1Q14863 301 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 GALNTL6Q49A17 601 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 PCID2Q5JVF3 399 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 ZNF354CQ86Y25 554 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 ZNF461Q8TAF7 563 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 FATE1Q969F0 183 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 PABPC5Q96DU9 382 aaKnown RBP18.66■□□□□ 0.58
CCDC43-201ENST00000315286 CEP295NLQ96MC4 621 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 PPP1R2P1Q96PQ5 205 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 RBBP8Q99708 897 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 SLC25A51Q9H1U9 297 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 ATXN3LQ9H3M9 355 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 SP110Q9HB58 689 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 RXFP1Q9HBX9 757 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 NPHS2Q9NP85 383 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 NT5MQ9NPB1 228 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 ENTPD7Q9NQZ7 604 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 MYLKQ15746 1914 aa18.66■□□□□ 0.58
CCDC43-201ENST00000315286 GOLGA8TH3BQL2 631 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 ABLIM3O94929 683 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 OR1E1P30953 314 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 MAXP61244 160 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 POLD3Q15054 466 aaPredicted RBP18.65■□□□□ 0.58
CCDC43-201ENST00000315286 PPM1JQ5JR12 505 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 ACBD5Q5T8D3 534 aaPredicted RBP18.65■□□□□ 0.58
CCDC43-201ENST00000315286 MARC1Q5VT66 337 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 PKN3Q6P5Z2 889 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 RANBP10Q6VN20 620 aa18.65■□□□□ 0.58
CCDC43-201ENST00000315286 ANKLE1Q8NAG6 615 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms