RNA–Protein interactions for RNA: ENST00000312988.8

TUBA3E-201, Transcript of tubulin alpha 3e, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3E, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3E-201ENST00000312988 C2orf27AQ580R0 203 aa16.04■□□□□ 0.16
TUBA3E-201ENST00000312988 EMC10Q5UCC4 262 aa16.04■□□□□ 0.16
TUBA3E-201ENST00000312988 EGFLAMQ63HQ2 1017 aa16.04■□□□□ 0.16
TUBA3E-201ENST00000312988 CREG2Q8IUH2 290 aa16.04■□□□□ 0.16
TUBA3E-201ENST00000312988 CDKL3Q8IVW4 592 aaPredicted RBP16.04■□□□□ 0.16
TUBA3E-201ENST00000312988 CCDC13Q8IYE1 715 aa16.04■□□□□ 0.16
TUBA3E-201ENST00000312988 ZNF513Q8N8E2 541 aaPredicted RBP16.04■□□□□ 0.16
TUBA3E-201ENST00000312988 FLCNQ8NFG4 579 aa16.04■□□□□ 0.16
TUBA3E-201ENST00000312988 CCDC26Q8TAB7 109 aa16.04■□□□□ 0.16
TUBA3E-201ENST00000312988 EZH1Q92800 747 aaPredicted RBP16.04■□□□□ 0.16
TUBA3E-201ENST00000312988 NELL2Q99435 816 aa16.04■□□□□ 0.16
TUBA3E-201ENST00000312988 FERMT1Q9BQL6 677 aa16.04■□□□□ 0.16
TUBA3E-201ENST00000312988 FRMD8P1Q9BZ68 369 aaPredicted RBP16.04■□□□□ 0.16
TUBA3E-201ENST00000312988 ZDHHC4Q9NPG8 344 aa16.04■□□□□ 0.16
TUBA3E-201ENST00000312988 RNF14Q9UBS8 474 aa16.04■□□□□ 0.16
TUBA3E-201ENST00000312988 SLC8A2Q9UPR5 921 aa16.04■□□□□ 0.16
TUBA3E-201ENST00000312988 CHD5Q8TDI0 1954 aa16.04■□□□□ 0.16
TUBA3E-201ENST00000312988 HACD1B0YJ81 288 aa16.03■□□□□ 0.16
TUBA3E-201ENST00000312988 SLC34A2O95436 690 aa16.03■□□□□ 0.16
TUBA3E-201ENST00000312988 SRPRAP08240 638 aaKnown RBP16.03■□□□□ 0.16
TUBA3E-201ENST00000312988 CCNCP24863 283 aa16.03■□□□□ 0.16
TUBA3E-201ENST00000312988 SLC20A2Q08357 652 aa16.03■□□□□ 0.16
TUBA3E-201ENST00000312988 PPIDQ08752 370 aaKnown RBP16.03■□□□□ 0.16
TUBA3E-201ENST00000312988 XRCC4Q13426 336 aa16.03■□□□□ 0.16
TUBA3E-201ENST00000312988 SLC45A4Q5BKX6 768 aa16.03■□□□□ 0.16
TUBA3E-201ENST00000312988 DGKKQ5KSL6 1271 aa16.03■□□□□ 0.16
TUBA3E-201ENST00000312988 TMCO4Q5TGY1 634 aa16.03■□□□□ 0.16
TUBA3E-201ENST00000312988 TRIM67Q6ZTA4 783 aa16.03■□□□□ 0.16
TUBA3E-201ENST00000312988 CHPFQ8IZ52 775 aa16.03■□□□□ 0.16
TUBA3E-201ENST00000312988 TSGA13Q96PP4 275 aa16.03■□□□□ 0.16
TUBA3E-201ENST00000312988 QKIQ96PU8 341 aaKnown RBP eCLIP16.03■□□□□ 0.16
TUBA3E-201ENST00000312988 LMAN1LQ9HAT1 526 aa16.03■□□□□ 0.16
TUBA3E-201ENST00000312988 MTF2Q9Y483 593 aaPredicted RBP16.03■□□□□ 0.16
TUBA3E-201ENST00000312988 ACTL7AQ9Y615 435 aa16.03■□□□□ 0.16
TUBA3E-201ENST00000312988 SHROOM3Q8TF72 1996 aa16.02■□□□□ 0.16
TUBA3E-201ENST00000312988 K7ERQ8 282 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 LIASO43766 372 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 RNF40O75150 1001 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 MT-CO1P00395 513 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 SERPINH1P50454 418 aaKnown RBP16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 CCINQ13939 588 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 ZNF234Q14588 700 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 SIX1Q15475 284 aaPredicted RBP16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 PTPRNQ16849 979 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 HEATR6Q6AI08 1181 aaKnown RBP16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 SDE2Q6IQ49 451 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 SERPINA13PQ6UXR4 307 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 BBS5Q8N3I7 341 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 USP33Q8TEY7 942 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 ZNF599Q96NL3 588 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 CINPQ9BW66 212 aaPredicted RBP16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 C10orf88Q9H8K7 445 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 PDFQ9HBH1 243 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 HOMER3Q9NSC5 361 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 CACNA2D2Q9NY47 1150 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 SLCO3A1Q9UIG8 710 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 CDC23Q9UJX2 597 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 DNPEPQ9ULA0 475 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 HS3ST2Q9Y278 367 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 FCF1Q9Y324 198 aaKnown RBP16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 STARD13Q9Y3M8 1113 aa16.02■□□□□ 0.15
TUBA3E-201ENST00000312988 TTC28Q96AY4 2481 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 ATG2BQ96BY7 2078 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 ANTXRLA6NF34 631 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 KCNK1O00180 336 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 MATN3O15232 486 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 TMCC1O94876 653 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 KLF8O95600 359 aaPredicted RBP16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 CHRNB1P11230 501 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 SRCP12931 536 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 WASP42768 502 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 KIR2DL1P43626 348 aaPredicted RBP16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 CLCN6P51797 869 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 MRPS21P82921 87 aaKnown RBP16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 BYSLQ13895 437 aaKnown RBP16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 ZNF235Q14590 738 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 LBRQ14739 615 aaKnown RBP16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 PRKD1Q15139 912 aaPredicted RBP16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 CCNG2Q16589 344 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 MARC1Q5VT66 337 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 TRMT11Q7Z4G4 463 aaKnown RBP16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 SH2D3CQ8N5H7 860 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 ALLCQ8N6M5 410 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 PRELID2Q8N945 189 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 RPLP0P6Q8NHW5 317 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 CASKIN2Q8WXE0 1202 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 MAGOHBQ96A72 148 aaKnown RBP16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 MRGPRX3Q96LB0 322 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 CCDC114Q96M63 670 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 THAP10Q9P2Z0 257 aaPredicted RBP16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 ZNF148Q9UQR1 794 aa16.01■□□□□ 0.15
TUBA3E-201ENST00000312988 TMEM221A6NGB7 291 aa16■□□□□ 0.15
TUBA3E-201ENST00000312988 TTC34A8MYJ7 566 aa16■□□□□ 0.15
TUBA3E-201ENST00000312988 M0R296 226 aa16■□□□□ 0.15
TUBA3E-201ENST00000312988 NPC1O15118 1278 aa16■□□□□ 0.15
TUBA3E-201ENST00000312988 KCNN4O15554 427 aa16■□□□□ 0.15
TUBA3E-201ENST00000312988 MTSS1O43312 755 aa16■□□□□ 0.15
TUBA3E-201ENST00000312988 SMAD6O43541 496 aaKnown RBP16■□□□□ 0.15
TUBA3E-201ENST00000312988 BNIP3LO60238 219 aa16■□□□□ 0.15
TUBA3E-201ENST00000312988 STK10O94804 968 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms