RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
SNED1-201ENST00000310397 hCG_1818297A0A087WSY0 165 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 TAF5Q15542 800 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 RFX4Q33E94 735 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 PCID2Q5JVF3 399 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 KHDRBS2Q5VWX1 349 aaKnown RBP13.35□□□□□ -0.27
SNED1-201ENST00000310397 LRRC4CQ9HCJ2 640 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 KLHL28Q9NXS3 571 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 MYL12BO14950 172 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 SEC24AO95486 1093 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 LTA4HP09960 611 aaKnown RBP13.35□□□□□ -0.27
SNED1-201ENST00000310397 CYP2A7P20853 494 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 CDH24Q86UP0 819 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 ALG3Q92685 438 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 PORCNQ9H237 461 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 HPS4Q9NQG7 708 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 FGF10O15520 208 aaPredicted RBP13.35□□□□□ -0.27
SNED1-201ENST00000310397 VTNP04004 478 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 WARSP23381 471 aaKnown RBP13.35□□□□□ -0.27
SNED1-201ENST00000310397 MZT2BQ6NZ67 158 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 CES3Q6UWW8 571 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 NEK10Q6ZWH5 1172 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 MILR1Q7Z6M3 343 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 MIB1Q86YT6 1006 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 MBOAT7Q96N66 472 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 TLR8Q9NR97 1041 aaKnown RBP13.35□□□□□ -0.27
SNED1-201ENST00000310397 KCNH4Q9UQ05 1017 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 PLLPQ9Y342 182 aa13.35□□□□□ -0.27
SNED1-201ENST00000310397 SEC22BO75396 215 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 YBX3P16989 372 aaKnown RBP eCLIP13.34□□□□□ -0.27
SNED1-201ENST00000310397 ZNF846Q147U1 533 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 ADCY4Q8NFM4 1077 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 NDNQ99608 321 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 RIBC2Q9H4K1 309 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 POLR1BQ9H9Y6 1135 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 SAE1Q9UBE0 346 aaPredicted RBP13.34□□□□□ -0.27
SNED1-201ENST00000310397 VAV3Q9UKW4 847 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 PCDHB7Q9Y5E2 793 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.34□□□□□ -0.27
SNED1-201ENST00000310397 ITGA2BP08514 1039 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 VAV1P15498 845 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 IL2P60568 153 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 DLG4P78352 724 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 PPP4R4Q6NUP7 873 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 NECAB2Q7Z6G3 386 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 DHX33Q9H6R0 707 aaKnown RBP13.34□□□□□ -0.27
SNED1-201ENST00000310397 POPDC2Q9HBU9 364 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 CATSPERZQ9NTU4 200 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 S100A3P33764 101 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 INSCQ1MX18 579 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 RINLQ6ZS11 566 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 IRF2BP1Q8IU81 584 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 GIPC3Q8TF64 312 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 MKL1Q969V6 931 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 L3MBTL3Q96JM7 780 aaPredicted RBP13.34□□□□□ -0.27
SNED1-201ENST00000310397 NINQ8N4C6 2090 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 H7C0S8 307 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 CAPN1P07384 714 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 TPH1P17752 444 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 ANKRD13AQ8IZ07 590 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 PRMT6Q96LA8 375 aaPredicted RBP13.34□□□□□ -0.27
SNED1-201ENST00000310397 SERPINB11Q96P15 392 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 CRHR1P34998 444 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 HALP42357 657 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 DGKKQ5KSL6 1271 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 TCF12Q99081 682 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 COLEC11Q9BWP8 271 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 ARMC7Q9H6L4 198 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 SH3BP4Q9P0V3 963 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 C3P01024 1663 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 MGRN1O60291 552 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 IDO1P14902 403 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 PSMB4P28070 264 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 CLCN5P51795 746 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 CWF19L1Q69YN2 538 aaKnown RBP13.34□□□□□ -0.27
SNED1-201ENST00000310397 PCDH20Q8N6Y1 951 aaKnown RBP13.34□□□□□ -0.27
SNED1-201ENST00000310397 KBTBD8Q8NFY9 601 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 CEP41Q9BYV8 373 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 GAKO14976 1311 aa13.34□□□□□ -0.27
SNED1-201ENST00000310397 ZNF284Q2VY69 593 aa13.33□□□□□ -0.27
SNED1-201ENST00000310397 GNASQ5JWF2 1037 aa13.33□□□□□ -0.27
SNED1-201ENST00000310397 ZCCHC8Q6NZY4 707 aaKnown RBP13.33□□□□□ -0.27
SNED1-201ENST00000310397 SLIT3O75094 1523 aa13.33□□□□□ -0.27
SNED1-201ENST00000310397 TNS2Q63HR2 1409 aa13.33□□□□□ -0.27
SNED1-201ENST00000310397 LOC100506127A0A0U1RQW1 187 aa13.33□□□□□ -0.27
SNED1-201ENST00000310397 MAGEC1O60732 1142 aa13.33□□□□□ -0.27
SNED1-201ENST00000310397 VCLP18206 1134 aa13.33□□□□□ -0.27
SNED1-201ENST00000310397 PAICSP22234 425 aaKnown RBP13.33□□□□□ -0.27
SNED1-201ENST00000310397 ZNF544Q6NX49 715 aa13.33□□□□□ -0.27
SNED1-201ENST00000310397 MYDGFQ969H8 173 aa13.33□□□□□ -0.27
SNED1-201ENST00000310397 TRMOQ9BU70 441 aa13.33□□□□□ -0.27
SNED1-201ENST00000310397 S100A14Q9HCY8 104 aa13.33□□□□□ -0.27
SNED1-201ENST00000310397 SH3GLB1Q9Y371 365 aa13.33□□□□□ -0.27
SNED1-201ENST00000310397 H3BN98 237 aa13.33□□□□□ -0.28
SNED1-201ENST00000310397 CDH8P55286 799 aa13.33□□□□□ -0.28
SNED1-201ENST00000310397 RPS7P62081 194 aaKnown RBP13.33□□□□□ -0.28
SNED1-201ENST00000310397 PFKFB4Q16877 469 aa13.33□□□□□ -0.28
SNED1-201ENST00000310397 INTS11Q5TA45 600 aaKnown RBP13.33□□□□□ -0.28
SNED1-201ENST00000310397 UNC5AQ6ZN44 842 aa13.33□□□□□ -0.28
SNED1-201ENST00000310397 REPS1Q96D71 796 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms