RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 ACDQ96AP0 544 aa9.29□□□□□ -0.92
PDE4D-201ENST00000309641 ZNF419Q96HQ0 510 aaPredicted RBP9.29□□□□□ -0.92
PDE4D-201ENST00000309641 HES6Q96HZ4 224 aa9.29□□□□□ -0.92
PDE4D-201ENST00000309641 TNKS2Q9H2K2 1166 aa9.29□□□□□ -0.92
PDE4D-201ENST00000309641 RETREG1Q9H6L5 497 aa9.29□□□□□ -0.92
PDE4D-201ENST00000309641 PRSS16Q9NQE7 514 aa9.29□□□□□ -0.92
PDE4D-201ENST00000309641 PRMT8Q9NR22 394 aaPredicted RBP9.29□□□□□ -0.92
PDE4D-201ENST00000309641 DDX56Q9NY93 547 aaKnown RBP9.29□□□□□ -0.92
PDE4D-201ENST00000309641 HS3ST2Q9Y278 367 aa9.29□□□□□ -0.92
PDE4D-201ENST00000309641 FCF1Q9Y324 198 aaKnown RBP9.29□□□□□ -0.92
PDE4D-201ENST00000309641 SDK1Q7Z5N4 2213 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 hCG_1818297A0A087WSY0 165 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 TCRBV21S2A2A0A5A6 115 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 CCDC66A2RUB6 948 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 GALR2O43603 387 aaPredicted RBP9.28□□□□□ -0.92
PDE4D-201ENST00000309641 KDELR3O43731 214 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 ATP9BO43861 1147 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 BNIP3LO60238 219 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 ATG13O75143 517 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 SIN3BO75182 1162 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 SRPRAP08240 638 aaKnown RBP9.28□□□□□ -0.92
PDE4D-201ENST00000309641 PECAM1P16284 738 aaPredicted RBP9.28□□□□□ -0.92
PDE4D-201ENST00000309641 GABRG2P18507 467 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 SERPINH1P50454 418 aaKnown RBP9.28□□□□□ -0.92
PDE4D-201ENST00000309641 CCR3P51677 355 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 COPAP53621 1224 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 SULT2A1Q06520 285 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 PAFAH1B3Q15102 231 aaKnown RBP9.28□□□□□ -0.92
PDE4D-201ENST00000309641 HNRNPA1L2Q32P51 320 aaKnown RBP9.28□□□□□ -0.92
PDE4D-201ENST00000309641 PARP15Q460N3 678 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 EOGTQ5NDL2 527 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 C9orf64Q5T6V5 341 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 SLC9A4Q6AI14 798 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 RFX6Q8HWS3 928 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 CCDC50Q8IVM0 306 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 SYCE1Q8N0S2 351 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 FRMD1Q8N878 549 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 EXD1Q8NHP7 514 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 HMGB4Q8WW32 186 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 CALR3Q96L12 384 aaKnown RBP9.28□□□□□ -0.92
PDE4D-201ENST00000309641 TPSD1Q9BZJ3 242 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 PDFQ9HBH1 243 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 DTLQ9NZJ0 730 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 SLC25A13Q9UJS0 675 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 SLC8A2Q9UPR5 921 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 HEY1Q9Y5J3 304 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 SHROOM3Q8TF72 1996 aa9.28□□□□□ -0.92
PDE4D-201ENST00000309641 MAFKO60675 156 aa9.27□□□□□ -0.92
PDE4D-201ENST00000309641 CST8O60676 142 aa9.27□□□□□ -0.92
PDE4D-201ENST00000309641 GJB3O75712 270 aa9.27□□□□□ -0.92
PDE4D-201ENST00000309641 NDUFV2P19404 249 aa9.27□□□□□ -0.92
PDE4D-201ENST00000309641 FNTBP49356 437 aa9.27□□□□□ -0.92
PDE4D-201ENST00000309641 METAP1P53582 386 aa9.27□□□□□ -0.92
PDE4D-201ENST00000309641 ST8SIA6P61647 398 aa9.27□□□□□ -0.92
PDE4D-201ENST00000309641 TCF15Q12870 199 aa9.27□□□□□ -0.92
PDE4D-201ENST00000309641 SRSF5Q13243 272 aaKnown RBP9.27□□□□□ -0.92
PDE4D-201ENST00000309641 CAMK2GQ13555 558 aaPredicted RBP9.27□□□□□ -0.92
PDE4D-201ENST00000309641 HSF5Q4G112 596 aaPredicted RBP9.27□□□□□ -0.92
PDE4D-201ENST00000309641 TFDP3Q5H9I0 405 aa9.27□□□□□ -0.92
PDE4D-201ENST00000309641 MEI1Q5TIA1 1274 aa9.27□□□□□ -0.92
PDE4D-201ENST00000309641 SDE2Q6IQ49 451 aa9.27□□□□□ -0.92
PDE4D-201ENST00000309641 TRMT11Q7Z4G4 463 aaKnown RBP9.27□□□□□ -0.92
PDE4D-201ENST00000309641 RCOR2Q8IZ40 523 aa9.27□□□□□ -0.92
PDE4D-201ENST00000309641 STK40Q8N2I9 435 aa9.27□□□□□ -0.92
PDE4D-201ENST00000309641 CCDC26Q8TAB7 109 aa9.27□□□□□ -0.92
PDE4D-201ENST00000309641 VOPP1Q96AW1 172 aa9.27□□□□□ -0.92
PDE4D-201ENST00000309641 HAUS1Q96CS2 278 aa9.27□□□□□ -0.92
PDE4D-201ENST00000309641 MRGPRX1Q96LB2 322 aa9.27□□□□□ -0.92
PDE4D-201ENST00000309641 TLR10Q9BXR5 811 aa9.27□□□□□ -0.92
PDE4D-201ENST00000309641 TM6SF2Q9BZW4 377 aa9.27□□□□□ -0.92
PDE4D-201ENST00000309641 IPO11Q9UI26 975 aaKnown RBP9.27□□□□□ -0.92
PDE4D-201ENST00000309641 INVSQ9Y283 1065 aa9.27□□□□□ -0.92
PDE4D-201ENST00000309641 TCRBV7S2A1N4TA0A589 114 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 ARHGAP42A6NI28 874 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 ZNF487B1APH4 448 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 ENC1O14682 589 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 PRAMEF11O60813 436 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 TMCC1O94876 653 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 PAPSS2O95340 614 aaPredicted RBP9.27□□□□□ -0.93
PDE4D-201ENST00000309641 PEX11BO96011 259 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 SP9P0CG40 484 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 GKP32189 559 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 ETFBP38117 255 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 DGKEP52429 567 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 RWDD2BP57060 319 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 ODF2Q5BJF6 829 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 RETSATQ6NUM9 610 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 SLC35F6Q8N357 371 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 LZTR1Q8N653 840 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 CHST14Q8NCH0 376 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 TSTD1Q8NFU3 115 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 OR2A12Q8NGT7 310 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 OR6K2Q8NGY2 324 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 RLN3Q8WXF3 142 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 EXOC2Q96KP1 924 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 FAM129BQ96TA1 746 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 LGMNQ99538 433 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 FAM118BQ9BPY3 351 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 IER2Q9BTL4 223 aa9.27□□□□□ -0.93
PDE4D-201ENST00000309641 EBF1Q9UH73 591 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms