RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 ZNF669Q96BR6 464 aaPredicted RBP21.65■■□□□ 1.06
ATG4D-201ENST00000309469 CABS1Q96KC9 395 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 SLC17A7Q9P2U7 560 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 PRRG1O14668 218 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 RAMP2O60895 175 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 OR1E1P30953 314 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 ELF1P32519 619 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 MAPKAPK2P49137 400 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 SLC11A2P49281 568 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 PLD1Q13393 1074 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 POLD3Q15054 466 aaPredicted RBP21.65■■□□□ 1.06
ATG4D-201ENST00000309469 PARP15Q460N3 678 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 C5orf22Q49AR2 442 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 MROH9Q5TGP6 573 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 PACS1Q6VY07 963 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 RGS9BPQ6ZS82 235 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 OTOP2Q7RTS6 562 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 LGI2Q8N0V4 545 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.65■■□□□ 1.06
ATG4D-201ENST00000309469 IPMKQ8NFU5 416 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 SP110Q9HB58 689 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 MRPL17Q9NRX2 175 aaKnown RBP21.65■■□□□ 1.06
ATG4D-201ENST00000309469 SLC17A6Q9P2U8 582 aa21.65■■□□□ 1.06
ATG4D-201ENST00000309469 SHROOM3Q8TF72 1996 aa21.64■■□□□ 1.06
ATG4D-201ENST00000309469 ZCWPW2A0A1B0GU75 182 aa21.64■■□□□ 1.05
ATG4D-201ENST00000309469 ERVK-10P10266 1014 aa21.64■■□□□ 1.05
ATG4D-201ENST00000309469 ADRA1DP25100 572 aa21.64■■□□□ 1.05
ATG4D-201ENST00000309469 YBEYP58557 167 aaPredicted RBP21.64■■□□□ 1.05
ATG4D-201ENST00000309469 TWF1Q12792 350 aa21.64■■□□□ 1.05
ATG4D-201ENST00000309469 IFT88Q13099 833 aa21.64■■□□□ 1.05
ATG4D-201ENST00000309469 MARC1Q5VT66 337 aa21.64■■□□□ 1.05
ATG4D-201ENST00000309469 TIFABQ6ZNK6 161 aa21.64■■□□□ 1.05
ATG4D-201ENST00000309469 YTHDF3Q7Z739 585 aaKnown RBP21.64■■□□□ 1.05
ATG4D-201ENST00000309469 RASSF3Q86WH2 238 aa21.64■■□□□ 1.05
ATG4D-201ENST00000309469 PSMG2Q969U7 264 aa21.64■■□□□ 1.05
ATG4D-201ENST00000309469 C12orf65Q9H3J6 166 aaKnown RBP21.64■■□□□ 1.05
ATG4D-201ENST00000309469 CHRAC1Q9NRG0 131 aa21.64■■□□□ 1.05
ATG4D-201ENST00000309469 SOX13Q9UN79 622 aa21.64■■□□□ 1.05
ATG4D-201ENST00000309469 NYNRINQ9P2P1 1898 aaKnown RBP21.63■■□□□ 1.05
ATG4D-201ENST00000309469 COPEO14579 308 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 SNX3O60493 162 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 SLC6A4P31645 630 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 ADRA1AP35348 466 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 PPM1AP35813 382 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 CCNFP41002 786 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 ZKSCAN8Q15776 578 aaPredicted RBP21.63■■□□□ 1.05
ATG4D-201ENST00000309469 FAM133BQ5BKY9 247 aaKnown RBP21.63■■□□□ 1.05
ATG4D-201ENST00000309469 ZNF354CQ86Y25 554 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 TCEAL8Q8IYN2 117 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 PLD4Q96BZ4 506 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 FICDQ9BVA6 458 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 SLC25A51Q9H1U9 297 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 IL23AQ9NPF7 189 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 ZFATQ9P243 1243 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 HSPA8P11142 646 aaKnown RBP21.63■■□□□ 1.05
ATG4D-201ENST00000309469 PPP3CCP48454 512 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 IL10RBQ08334 325 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 SLC10A7Q0GE19 358 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 SF3A3Q12874 501 aaKnown RBP eCLIP21.63■■□□□ 1.05
ATG4D-201ENST00000309469 ITIH4Q14624 930 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 DENND5AQ6IQ26 1287 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 RFWD3Q6PCD5 774 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 DNAJB7Q7Z6W7 309 aaPredicted RBP21.63■■□□□ 1.05
ATG4D-201ENST00000309469 CFAP52Q8N1V2 620 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 TEX26Q8N6G2 289 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 ANKS4BQ8N8V4 417 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 NSMCE1Q8WV22 266 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 PABPC5Q96DU9 382 aaKnown RBP21.63■■□□□ 1.05
ATG4D-201ENST00000309469 MFSD3Q96ES6 412 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 KLHL5Q96PQ7 755 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 RNF38Q9H0F5 515 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 NT5MQ9NPB1 228 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 ENTPD7Q9NQZ7 604 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 IL1RAPL1Q9NZN1 696 aa21.63■■□□□ 1.05
ATG4D-201ENST00000309469 PMPCBO75439 489 aa21.62■■□□□ 1.05
ATG4D-201ENST00000309469 ALADP13716 330 aa21.62■■□□□ 1.05
ATG4D-201ENST00000309469 EPHB3P54753 998 aa21.62■■□□□ 1.05
ATG4D-201ENST00000309469 DNAJC3Q13217 504 aa21.62■■□□□ 1.05
ATG4D-201ENST00000309469 SERINC3Q13530 473 aa21.62■■□□□ 1.05
ATG4D-201ENST00000309469 DENND1CQ8IV53 801 aa21.62■■□□□ 1.05
ATG4D-201ENST00000309469 LRRC8CQ8TDW0 803 aa21.62■■□□□ 1.05
ATG4D-201ENST00000309469 AZIN2Q96A70 460 aa21.62■■□□□ 1.05
ATG4D-201ENST00000309469 KIFC1Q9BW19 673 aa21.62■■□□□ 1.05
ATG4D-201ENST00000309469 VPS11Q9H270 941 aa21.62■■□□□ 1.05
ATG4D-201ENST00000309469 RETREG1Q9H6L5 497 aa21.62■■□□□ 1.05
ATG4D-201ENST00000309469 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.62■■□□□ 1.05
ATG4D-201ENST00000309469 GKN1Q9NS71 199 aa21.62■■□□□ 1.05
ATG4D-201ENST00000309469 MAFFQ9ULX9 164 aa21.62■■□□□ 1.05
ATG4D-201ENST00000309469 PCDHB12Q9Y5F1 795 aa21.62■■□□□ 1.05
ATG4D-201ENST00000309469 PSAT1Q9Y617 370 aa21.62■■□□□ 1.05
ATG4D-201ENST00000309469 TEX28O15482 410 aa21.61■■□□□ 1.05
ATG4D-201ENST00000309469 LILRB3O75022 631 aa21.61■■□□□ 1.05
ATG4D-201ENST00000309469 STC2O76061 302 aa21.61■■□□□ 1.05
ATG4D-201ENST00000309469 ACVRL1P37023 503 aa21.61■■□□□ 1.05
ATG4D-201ENST00000309469 ETV4P43268 484 aa21.61■■□□□ 1.05
ATG4D-201ENST00000309469 TNK2Q07912 1038 aa21.61■■□□□ 1.05
ATG4D-201ENST00000309469 MPP3Q13368 585 aa21.61■■□□□ 1.05
ATG4D-201ENST00000309469 SMAD1Q15797 465 aaKnown RBP21.61■■□□□ 1.05
ATG4D-201ENST00000309469 GPR65Q8IYL9 337 aa21.61■■□□□ 1.05
ATG4D-201ENST00000309469 OTUD6BQ8N6M0 293 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms