RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 PPP1R16AQ96I34 528 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 BTBD1Q9H0C5 482 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 SP110Q9HB58 689 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 CD248Q9HCU0 757 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 USP36Q9P275 1121 aaKnown RBP20.25■□□□□ 0.83
VEGFB-201ENST00000309422 RCOR3Q9P2K3 495 aaPredicted RBP20.25■□□□□ 0.83
VEGFB-201ENST00000309422 ZNF212Q9UDV6 495 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 NEU3Q9UQ49 428 aa20.25■□□□□ 0.83
VEGFB-201ENST00000309422 ATG2BQ96BY7 2078 aa20.24■□□□□ 0.83
VEGFB-201ENST00000309422 IGHV1OR15-9A0A0B4J2B8 117 aa20.24■□□□□ 0.83
VEGFB-201ENST00000309422 GOLGA6L3A6NEY3 463 aa20.24■□□□□ 0.83
VEGFB-201ENST00000309422 SOWAHDA6NJG2 315 aa20.24■□□□□ 0.83
VEGFB-201ENST00000309422 RASA4BC9J798 803 aa20.24■□□□□ 0.83
VEGFB-201ENST00000309422 RASA4O43374 803 aa20.24■□□□□ 0.83
VEGFB-201ENST00000309422 LRP3O75074 770 aa20.24■□□□□ 0.83
VEGFB-201ENST00000309422 MTA2O94776 668 aa20.24■□□□□ 0.83
VEGFB-201ENST00000309422 EPN2O95208 641 aa20.24■□□□□ 0.83
VEGFB-201ENST00000309422 C5AR1P21730 350 aa20.24■□□□□ 0.83
VEGFB-201ENST00000309422 ACVRL1P37023 503 aa20.24■□□□□ 0.83
VEGFB-201ENST00000309422 C9orf64Q5T6V5 341 aa20.24■□□□□ 0.83
VEGFB-201ENST00000309422 RABEPKQ7Z6M1 372 aa20.24■□□□□ 0.83
VEGFB-201ENST00000309422 UMODL1-AS1Q8N2C9 162 aa20.24■□□□□ 0.83
VEGFB-201ENST00000309422 STK40Q8N2I9 435 aa20.24■□□□□ 0.83
VEGFB-201ENST00000309422 CALN1Q9BXU9 219 aa20.24■□□□□ 0.83
VEGFB-201ENST00000309422 ACE2Q9BYF1 805 aaPredicted RBP20.24■□□□□ 0.83
VEGFB-201ENST00000309422 ITM2CQ9NQX7 267 aa20.24■□□□□ 0.83
VEGFB-201ENST00000309422 KDELR3O43731 214 aa20.23■□□□□ 0.83
VEGFB-201ENST00000309422 RNASEH2AO75792 299 aaKnown RBP20.23■□□□□ 0.83
VEGFB-201ENST00000309422 LCA5LO95447 670 aa20.23■□□□□ 0.83
VEGFB-201ENST00000309422 PRNPP04156 253 aa20.23■□□□□ 0.83
VEGFB-201ENST00000309422 ERCC2P18074 760 aa20.23■□□□□ 0.83
VEGFB-201ENST00000309422 BCKDHBP21953 392 aa20.23■□□□□ 0.83
VEGFB-201ENST00000309422 IL1R2P27930 398 aa20.23■□□□□ 0.83
VEGFB-201ENST00000309422 RAD51Q06609 339 aa20.23■□□□□ 0.83
VEGFB-201ENST00000309422 PDK2Q15119 407 aa20.23■□□□□ 0.83
VEGFB-201ENST00000309422 WDR45BQ5MNZ6 344 aa20.23■□□□□ 0.83
VEGFB-201ENST00000309422 USP30Q70CQ3 517 aa20.23■□□□□ 0.83
VEGFB-201ENST00000309422 ARMCX6Q7L4S7 300 aa20.23■□□□□ 0.83
VEGFB-201ENST00000309422 POLNQ7Z5Q5 900 aa20.23■□□□□ 0.83
VEGFB-201ENST00000309422 FAM124AQ86V42 546 aa20.23■□□□□ 0.83
VEGFB-201ENST00000309422 C12orf50Q8NA57 414 aaPredicted RBP20.23■□□□□ 0.83
VEGFB-201ENST00000309422 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.23■□□□□ 0.83
VEGFB-201ENST00000309422 NSMCE1Q8WV22 266 aa20.23■□□□□ 0.83
VEGFB-201ENST00000309422 HMCESQ96FZ2 354 aa20.23■□□□□ 0.83
VEGFB-201ENST00000309422 TOE1Q96GM8 510 aaKnown RBP20.23■□□□□ 0.83
VEGFB-201ENST00000309422 MAGEB5Q9BZ81 275 aa20.23■□□□□ 0.83
VEGFB-201ENST00000309422 DUSP15Q9H1R2 295 aaPredicted RBP20.23■□□□□ 0.83
VEGFB-201ENST00000309422 PABPC3Q9H361 631 aaKnown RBP20.23■□□□□ 0.83
VEGFB-201ENST00000309422 MTG2Q9H4K7 406 aa20.23■□□□□ 0.83
VEGFB-201ENST00000309422 SGK2Q9HBY8 427 aa20.23■□□□□ 0.83
VEGFB-201ENST00000309422 NDFIP2Q9NV92 336 aa20.23■□□□□ 0.83
VEGFB-201ENST00000309422 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.22■□□□□ 0.83
VEGFB-201ENST00000309422 DFFAO00273 331 aa20.22■□□□□ 0.83
VEGFB-201ENST00000309422 GLDCP23378 1020 aa20.22■□□□□ 0.83
VEGFB-201ENST00000309422 SNRPD1P62314 119 aaKnown RBP20.22■□□□□ 0.83
VEGFB-201ENST00000309422 ARF5P84085 180 aa20.22■□□□□ 0.83
VEGFB-201ENST00000309422 IFI16Q16666 785 aaKnown RBP20.22■□□□□ 0.83
VEGFB-201ENST00000309422 TMEFF1Q8IYR6 380 aa20.22■□□□□ 0.83
VEGFB-201ENST00000309422 RGL4Q8IZJ4 473 aa20.22■□□□□ 0.83
VEGFB-201ENST00000309422 CCDC112Q8NEF3 446 aa20.22■□□□□ 0.83
VEGFB-201ENST00000309422 FRS2Q8WU20 508 aa20.22■□□□□ 0.83
VEGFB-201ENST00000309422 PTPRN2Q92932 1015 aa20.22■□□□□ 0.83
VEGFB-201ENST00000309422 ZNF670Q9BS34 389 aa20.22■□□□□ 0.83
VEGFB-201ENST00000309422 HAUS2Q9NVX0 235 aa20.22■□□□□ 0.83
VEGFB-201ENST00000309422 FBXL12Q9NXK8 326 aa20.22■□□□□ 0.83
VEGFB-201ENST00000309422 CWC15Q9P013 229 aaKnown RBP20.22■□□□□ 0.83
VEGFB-201ENST00000309422 UBA2Q9UBT2 640 aaPredicted RBP20.22■□□□□ 0.83
VEGFB-201ENST00000309422 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.22■□□□□ 0.83
VEGFB-201ENST00000309422 MUC22E2RYF6 1773 aaPredicted RBP20.22■□□□□ 0.83
VEGFB-201ENST00000309422 A0A0A6YYK5 440 aaPredicted RBP20.21■□□□□ 0.83
VEGFB-201ENST00000309422 LRRC72A6NJI9 287 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 MCF2LO15068 1137 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 MID1O15344 667 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 GNSP15586 552 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 FECHP22830 423 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 SLC8A1P32418 973 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 MPLP40238 635 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 BBS5Q8N3I7 341 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 ATPAF2Q8N5M1 289 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 CELF6Q96J87 481 aaKnown RBP20.21■□□□□ 0.83
VEGFB-201ENST00000309422 HSPA12BQ96MM6 686 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 ZNF830Q96NB3 372 aaPredicted RBP20.21■□□□□ 0.83
VEGFB-201ENST00000309422 CSPG4P5Q96PW8 444 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 GPR174Q9BXC1 333 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 PCED1AQ9H1Q7 454 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 ARRDC1-AS1Q9H2J1 176 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 PCDH18Q9HCL0 1135 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 SUSD2Q9UGT4 822 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 IL36AQ9UHA7 158 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 FZD4Q9ULV1 537 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 KPNA3O00505 521 aaPredicted RBP20.21■□□□□ 0.83
VEGFB-201ENST00000309422 SEMA4FO95754 770 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 IGSF6O95976 241 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 MT-CO1P00395 513 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 IGLV3-19P01714 112 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 VAV1P15498 845 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 TCF4P15884 667 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 RHOAP61586 193 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 SERINC3Q13530 473 aa20.21■□□□□ 0.83
VEGFB-201ENST00000309422 DPYSQ14117 519 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms