RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 NTRK1P04629 796 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 CCNYL3P0C7X3 344 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 THRBP10828 461 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 UGT2B15P54855 530 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 AKAP1Q92667 903 aaKnown RBP eCLIP13.57□□□□□ -0.241e-11■■□□□ 12.3
TRIM56-201ENST00000306085 GORASP1Q9BQQ3 440 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 PLGRKTQ9HBL7 147 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 TOPBP1Q92547 1522 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 TRIM64BA6NI03 449 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 PTPN3P26045 913 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 PNMA5Q96PV4 448 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 SNX7Q9UNH6 387 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 DNMBPQ6XZF7 1577 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 XIAPP98170 497 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 TNFAIP8L3Q5GJ75 292 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 PLEKHF1Q96S99 279 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 AAASQ9NRG9 546 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 BUD31P41223 144 aaPredicted RBP13.57□□□□□ -0.24
TRIM56-201ENST00000306085 ATXN1P54253 815 aaKnown RBP13.57□□□□□ -0.24
TRIM56-201ENST00000306085 CBWD6Q4V339 395 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 PAN2Q504Q3 1202 aaKnown RBP13.57□□□□□ -0.24
TRIM56-201ENST00000306085 METTL6Q8TCB7 284 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 PHF20Q9BVI0 1012 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 IGSF9BQ9UPX0 1349 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 WDR27A2RRH5 827 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 ZNF234Q14588 700 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 CARTPTQ16568 116 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 AP5B1Q2VPB7 878 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 PRR23CQ6ZRP0 262 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 ANKRD6Q9Y2G4 727 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 PRKCEQ02156 737 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 ZNF554Q86TJ5 538 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 CRYL1Q9Y2S2 319 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 SSU72P8A0A1W2PR75 194 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 ANKDD1BA6NHY2 528 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 ZSCAN5BA6NJL1 495 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 GAS2O43903 313 aaKnown RBP13.57□□□□□ -0.24
TRIM56-201ENST00000306085 CDKL4Q5MAI5 379 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 CIR1Q86X95 450 aaPredicted RBP13.57□□□□□ -0.24
TRIM56-201ENST00000306085 GANQ9H2C0 597 aa13.57□□□□□ -0.24
TRIM56-201ENST00000306085 CDHR2Q9BYE9 1310 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 BTN3A1O00481 513 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 CCNJLQ8IV13 435 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 POF1BQ8WVV4 589 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 TMBIM4Q9HC24 238 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 PIH1D1Q9NWS0 290 aaKnown RBP13.56□□□□□ -0.24
TRIM56-201ENST00000306085 STOX2Q9P2F5 926 aaPredicted RBP13.56□□□□□ -0.24
TRIM56-201ENST00000306085 DGKBQ9Y6T7 804 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 ARID1AO14497 2285 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 SRCP12931 536 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 NFKB1P19838 968 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 GPSM1Q86YR5 675 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 DEPDC4Q8N2C3 294 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 TPK1Q9H3S4 243 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 UCKL1Q9NWZ5 548 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 FAM240BA0A1B0GVZ2 78 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 OR10H3O60404 316 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 PRMT3O60678 531 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 MBTD1Q05BQ5 628 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 EFCAB12Q6NXP0 572 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 SLCO6A1Q86UG4 719 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 KCNMB4Q86W47 210 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 ZNF677Q86XU0 584 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 PCDH19Q8TAB3 1148 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 NKD1Q969G9 470 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 CDC42EP4Q9H3Q1 356 aaKnown RBP13.56□□□□□ -0.24
TRIM56-201ENST00000306085 CCSER2Q9H7U1 834 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 GATBO75879 557 aaKnown RBP13.56□□□□□ -0.24
TRIM56-201ENST00000306085 APOL3O95236 402 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 HYIQ5T013 277 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 INSRP06213 1382 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 KLHL5Q96PQ7 755 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 ARPC4P59998 168 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 PIK3R6Q5UE93 754 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 SHC4Q6S5L8 630 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 GLT6D1Q7Z4J2 308 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 METTL16Q86W50 562 aaKnown RBP13.56□□□□□ -0.24
TRIM56-201ENST00000306085 MCOLN3Q8TDD5 553 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 PRRG4Q9BZD6 226 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 PHF24Q9UPV7 400 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 SLC26A11Q86WA9 606 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 HGH1Q9BTY7 390 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 HMGCS2P54868 508 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 ZNF549Q6P9A3 640 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 WDR59Q6PJI9 974 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 PHF12Q96QT6 1004 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 FNDC11Q9BVV2 318 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 TRIM9Q9C026 710 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 ZCCHC2Q9C0B9 1178 aaKnown RBP13.56□□□□□ -0.24
TRIM56-201ENST00000306085 ATRXP46100 2492 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 PDK2Q15119 407 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 CHST4Q8NCG5 386 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 SGCDQ92629 289 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 THAP2Q9H0W7 228 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 NECTIN3Q9NQS3 549 aa13.56□□□□□ -0.24
TRIM56-201ENST00000306085 BSDC1Q9NW68 430 aaPredicted RBP13.56□□□□□ -0.24
TRIM56-201ENST00000306085 A2MP01023 1474 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 ZC3H11AO75152 810 aaKnown RBP eCLIP13.55□□□□□ -0.246e-7■■■■□ 24.7
TRIM56-201ENST00000306085 ETS2P15036 469 aa13.55□□□□□ -0.24
TRIM56-201ENST00000306085 ECHS1P30084 290 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms