RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 EEF1DP3Q658K8 133 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 JADE1Q6IE81 842 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 PMF1Q6P1K2 205 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 POTEHQ6S545 545 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 TRPM4Q8TD43 1214 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 JDP2Q8WYK2 163 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 ZNF641Q96N77 438 aaPredicted RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 NPLQ9BXD5 320 aaPredicted RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 DRC3Q9H069 523 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 FAM96AQ9H5X1 160 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 CASS4Q9NQ75 786 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 GTSE1Q9NYZ3 720 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 ERAP1Q9NZ08 941 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 NDUFA13Q9P0J0 144 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 FZD10Q9ULW2 581 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 Q9Y3F1 56 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 NAALAD2Q9Y3Q0 740 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 CORINQ9Y5Q5 1042 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 TMEM114B3SHH9 223 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 SOCS2O14508 198 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 UBFD1O14562 309 aaKnown RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 AKAP10O43572 662 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 IGLV3-25P01717 112 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 FUCA1P04066 466 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 SLC35E2BP0CK96 405 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 BMP2P12643 396 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 PIK3R1P27986 724 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 HTR7P34969 479 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 PGGT1BP53609 377 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 COPAP53621 1224 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 SNX16P57768 344 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 TUBA4AP68366 448 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 ROR1Q01973 937 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 LSM12Q3MHD2 195 aaKnown RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 HSDL1Q3SXM5 330 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 ZNF667Q5HYK9 610 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 C1orf146Q5VVC0 180 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 IL23RQ5VWK5 629 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 DENND5AQ6IQ26 1287 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 ERO1BQ86YB8 467 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 CDKL3Q8IVW4 592 aaPredicted RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 DEFB107AQ8IZN7 70 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 PGAM4Q8N0Y7 254 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 PDIK1LQ8N165 341 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 SMYD1Q8NB12 490 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 NMD3Q96D46 503 aaKnown RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 MRRFQ96E11 262 aaKnown RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 SGF29Q96ES7 293 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 CNDP2Q96KP4 475 aaKnown RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 PHF12Q96QT6 1004 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 CYP2S1Q96SQ9 504 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 TTC1Q99614 292 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 RNPEPQ9H4A4 650 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 SCUBE2Q9NQ36 999 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 ARMC1Q9NVT9 282 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 CPSF2Q9P2I0 782 aaKnown RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 PPARGC1AQ9UBK2 798 aaKnown RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 ZC3H7BQ9UGR2 993 aaKnown RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 EBF1Q9UH73 591 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 LRRIQ4A6NIV6 560 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 SDHDO14521 159 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 B4GALT5O43286 388 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 DAB1O75553 588 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 KLHL2O95198 593 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 GNAO1P09471 354 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 EPHX2P34913 555 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 ACADSBP45954 432 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 PSMC1P62191 440 aaKnown RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 DYNLT1P63172 113 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 HIC1Q14526 733 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 SOWAHAQ2M3V2 549 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 SLC36A3Q495N2 470 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 GSTA5Q7RTV2 222 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 CCDC185Q8N715 623 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 ANKRD52Q8NB46 1076 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 CLEC4CQ8WTT0 213 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 STYXQ8WUJ0 223 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 TADA1Q96BN2 335 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 ZFRQ96KR1 1074 aaKnown RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 BTN2A3PQ96KV6 586 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 RPF2Q9H7B2 306 aaKnown RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 RPF1Q9H9Y2 349 aaKnown RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.55□□□□□ -1.52
VPS50-202ENST00000305866 IRAK4Q9NWZ3 460 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 OSER1Q9NX31 292 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 FNIP2Q9P278 1114 aa5.55□□□□□ -1.52
VPS50-202ENST00000305866 SUCOQ9UBS9 1254 aaKnown RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 CTDP1Q9Y5B0 961 aaPredicted RBP5.55□□□□□ -1.52
VPS50-202ENST00000305866 WDR27A2RRH5 827 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 PRORSD1PA6NEY8 169 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 PGK1P00558 417 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 FAM200BP0CF97 657 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 OSBPP22059 807 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 MYF6P23409 242 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 LIMK2P53671 638 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 PRKAA2P54646 552 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 IFITM3Q01628 133 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 EN1Q05925 392 aaPredicted RBP5.54□□□□□ -1.52
VPS50-202ENST00000305866 CD300CQ08708 224 aa5.54□□□□□ -1.52
VPS50-202ENST00000305866 PPP2R5DQ14738 602 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms