RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 TLE2Q04725 743 aa19.77■□□□□ 0.76
HOXC4-201ENST00000303406 OLIG2Q13516 323 aa19.77■□□□□ 0.76
HOXC4-201ENST00000303406 CERCAMQ5T4B2 595 aa19.77■□□□□ 0.76
HOXC4-201ENST00000303406 FBXL22Q6P050 247 aa19.77■□□□□ 0.76
HOXC4-201ENST00000303406 PRSS55Q6UWB4 352 aaPredicted RBP19.77■□□□□ 0.76
HOXC4-201ENST00000303406 TEX26Q8N6G2 289 aa19.77■□□□□ 0.76
HOXC4-201ENST00000303406 GPR152Q8TDT2 470 aa19.77■□□□□ 0.76
HOXC4-201ENST00000303406 C10orf82Q8WW14 230 aa19.77■□□□□ 0.76
HOXC4-201ENST00000303406 ATP2A3Q93084 1043 aa19.77■□□□□ 0.76
HOXC4-201ENST00000303406 PCMTD2Q9NV79 361 aa19.77■□□□□ 0.76
HOXC4-201ENST00000303406 SIRPGQ9P1W8 387 aa19.77■□□□□ 0.76
HOXC4-201ENST00000303406 DCDC2Q9UHG0 476 aa19.77■□□□□ 0.76
HOXC4-201ENST00000303406 LTBP2Q14767 1821 aa19.77■□□□□ 0.75
HOXC4-201ENST00000303406 TLR5O60602 858 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 DCTN3O75935 186 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 HADHAP40939 763 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 LIMK2P53671 638 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 SPRED3Q2MJR0 410 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 PARP15Q460N3 678 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 TRIM60Q495X7 471 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 TEDDM1Q5T9Z0 273 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 ATG16L1Q676U5 607 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 TPGS2Q68CL5 300 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 PDPK2PQ6A1A2 396 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 TSSK1BQ9BXA7 367 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 PPP1R12CQ9BZL4 782 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 VPS45Q9NRW7 570 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 WDR91A4D1P6 747 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 C2CD2LO14523 706 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 ATP9BO43861 1147 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 TBX18O95935 607 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 ALDOAP04075 364 aaKnown RBP19.76■□□□□ 0.75
HOXC4-201ENST00000303406 ERVK-10P10266 1014 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 PBX3P40426 434 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 SKIV2L2P42285 1042 aaKnown RBP19.76■□□□□ 0.75
HOXC4-201ENST00000303406 ATN1P54259 1190 aaPredicted RBP19.76■□□□□ 0.75
HOXC4-201ENST00000303406 CDK18Q07002 472 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 IL10RBQ08334 325 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 BNIP1Q12981 228 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 DENND5AQ6IQ26 1287 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 PKN3Q6P5Z2 889 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.76■□□□□ 0.752e-8■■■■□ 26.6
HOXC4-201ENST00000303406 KCNMB4Q86W47 210 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 PTPRN2Q92932 1015 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 AZIN2Q96A70 460 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 ZNF419Q96HQ0 510 aaPredicted RBP19.76■□□□□ 0.75
HOXC4-201ENST00000303406 RMDN2Q96LZ7 410 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 MCMBPQ9BTE3 642 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 HERC2P3Q9BVR0 1158 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 C12orf65Q9H3J6 166 aaKnown RBP19.76■□□□□ 0.75
HOXC4-201ENST00000303406 ARNT2Q9HBZ2 717 aa19.76■□□□□ 0.75
HOXC4-201ENST00000303406 TPP1O14773 563 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 TIMM44O43615 452 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 NEBLO76041 1014 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 UBOX5O94941 541 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 SOD2P04179 222 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 SERPINB8P50452 374 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 ALFQ53S48 1182 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 RAP1GAP2Q684P5 730 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 CES3Q6UWW8 571 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 RANBP10Q6VN20 620 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 DEFB128Q7Z7B8 93 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 MIB1Q86YT6 1006 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 PPHLN1Q8NEY8 458 aaKnown RBP19.75■□□□□ 0.75
HOXC4-201ENST00000303406 SPATA22Q8NHS9 363 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 NSMCE1Q8WV22 266 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 IGSF8Q969P0 613 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 HMCESQ96FZ2 354 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 IMP4Q96G21 291 aaKnown RBP19.75■□□□□ 0.75
HOXC4-201ENST00000303406 C7orf26Q96N11 449 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 FICDQ9BVA6 458 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 VN1R3Q9BXE9 311 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 PRKD2Q9BZL6 878 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 SLC13A1Q9BZW2 595 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 DNMT3LQ9UJW3 386 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 PSAT1Q9Y617 370 aa19.75■□□□□ 0.75
HOXC4-201ENST00000303406 ABHD14A-ACY1A0A1B0GW23 586 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 CFAP73A6NFT4 308 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 CNTN5O94779 1100 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 ABLIM3O94929 683 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 MPOP05164 745 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 BPGMP07738 259 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 TACR2P21452 398 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 BGNP21810 368 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 ATP5C1P36542 298 aaKnown RBP19.74■□□□□ 0.75
HOXC4-201ENST00000303406 PDE1BQ01064 536 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 SETDB1Q15047 1291 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 KDELC1Q6UW63 502 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 CNTN4Q8IWV2 1026 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 FITM2Q8N6M3 262 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 ARMC2Q8NEN0 867 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 IPMKQ8NFU5 416 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 GIPC2Q8TF65 315 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 MFSD3Q96ES6 412 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 MRGPRX2Q96LB1 330 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 MYRFLQ96LU7 910 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 RANBP9Q96S59 729 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 APOL2Q9BQE5 337 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 TRIM55Q9BYV6 548 aa19.74■□□□□ 0.75
HOXC4-201ENST00000303406 SP110Q9HB58 689 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms