RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 GPM6BQ13491 265 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 WDR59Q6PJI9 974 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 GPSM1Q86YR5 675 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 SEMA3CQ99985 751 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 ZDHHC4Q9NPG8 344 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 ACOT9Q9Y305 439 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 PIK3C2BO00750 1634 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 A0A0U1RQJ8 604 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 CCL22O00626 93 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 MAN1A2O60476 641 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 FSTL1Q12841 308 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 XKR6Q5GH73 641 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 IRGCQ6NXR0 463 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 AGMOQ6ZNB7 445 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 ADGRG6Q86SQ4 1221 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 CPA6Q8N4T0 437 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 POU5F2Q8N7G0 328 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 FBXO30Q8TB52 745 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 CYB5D2Q8WUJ1 264 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 HMGB4Q8WW32 186 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 OR8D1Q8WZ84 308 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 TMEM120AQ9BXJ8 343 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 CDC42EP4Q9H3Q1 356 aaKnown RBP7.91□□□□□ -1.14
SCN9A-201ENST00000303354 LIMD1Q9UGP4 676 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 CCDC154A6NI56 674 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 CABYRO75952 493 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 ELFN1P0C7U0 828 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 ITPKAP23677 461 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 TKTP29401 623 aaKnown RBP7.91□□□□□ -1.14
SCN9A-201ENST00000303354 GHDCQ8N2G8 530 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 CLHC1Q8NHS4 586 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 MTMR9Q96QG7 549 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 C11orf49Q9H6J7 331 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 ARMC7Q9H6L4 198 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 PLSCR1O15162 318 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 HS6ST1O60243 411 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 PROSCO94903 275 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 SELPP16109 830 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 CRYBB1P53674 252 aaPredicted RBP7.91□□□□□ -1.14
SCN9A-201ENST00000303354 CTBP1Q13363 440 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 CBX2Q14781 532 aaPredicted RBP7.91□□□□□ -1.14
SCN9A-201ENST00000303354 TSGA10IPQ3SY00 556 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 HID1Q8IV36 788 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 DAGLBQ8NCG7 672 aa7.91□□□□□ -1.14
SCN9A-201ENST00000303354 SSU72P8A0A1W2PR75 194 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 TRPC5OSA6NMA1 111 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 AXLP30530 894 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 CASP9P55211 416 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 POLR2LP62875 67 aaKnown RBP7.9□□□□□ -1.14
SCN9A-201ENST00000303354 NRG1Q02297 640 aaPredicted RBP7.9□□□□□ -1.14
SCN9A-201ENST00000303354 CYLC2Q14093 348 aaPredicted RBP7.9□□□□□ -1.14
SCN9A-201ENST00000303354 SEL1L3Q68CR1 1132 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 ZCCHC8Q6NZY4 707 aaKnown RBP7.9□□□□□ -1.14
SCN9A-201ENST00000303354 TADA1Q96BN2 335 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 DNAJA3Q96EY1 480 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 MAML3Q96JK9 1138 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 CDK5RAP1Q96SZ6 601 aaKnown RBP7.9□□□□□ -1.14
SCN9A-201ENST00000303354 NMUR1Q9HB89 426 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 UMODL1Q5DID0 1318 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 A0A1W2PRU2 124 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 IGF2BP3O00425 579 aaKnown RBP eCLIP7.9□□□□□ -1.14
SCN9A-201ENST00000303354 FGRP09769 529 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 TFPIP10646 304 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 IL2P60568 153 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 KCNMA1Q12791 1236 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 RNASE12Q5GAN4 147 aaKnown RBP7.9□□□□□ -1.14
SCN9A-201ENST00000303354 RIBC2Q9H4K1 309 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 SMG5Q9UPR3 1016 aaKnown RBP7.9□□□□□ -1.14
SCN9A-201ENST00000303354 WASF2Q9Y6W5 498 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 B4DGG1 531 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 FAM20BO75063 409 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 CDH16O75309 829 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 SLC25A12O75746 678 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 F7P08709 466 aaPredicted RBP7.9□□□□□ -1.14
SCN9A-201ENST00000303354 ANXA5P08758 320 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 VAV1P15498 845 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 NPR3P17342 541 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 GDI1P31150 447 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 KLC1Q07866 573 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 ECM1Q16610 540 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 HDDC3Q8N4P3 179 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 PHACTR1Q9C0D0 580 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 ZNF518BQ9C0D4 1074 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 KIAA1257Q9ULG3 409 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 OR2AG2A6NM03 316 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 ALDH4A1P30038 563 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 RNF168Q8IYW5 571 aaPredicted RBP7.9□□□□□ -1.14
SCN9A-201ENST00000303354 SELENOMQ8WWX9 145 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 MTA3Q9BTC8 594 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 HDHD2Q9H0R4 259 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 STOML1Q9UBI4 398 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 OPTCQ9UBM4 332 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 DRG1Q9Y295 367 aaKnown RBP7.9□□□□□ -1.14
SCN9A-201ENST00000303354 KLHL18O94889 574 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 TPBGLP0DKB5 382 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 NT5C2P49902 561 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 SNRPFP62306 86 aaKnown RBP7.9□□□□□ -1.14
SCN9A-201ENST00000303354 TMPRSS9Q7Z410 1059 aa7.9□□□□□ -1.14
SCN9A-201ENST00000303354 PCDH20Q8N6Y1 951 aaKnown RBP7.9□□□□□ -1.14
SCN9A-201ENST00000303354 DBF4BQ8NFT6 615 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms