RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 TRDMT1O14717 391 aaKnown RBP15.84■□□□□ 0.13
LSM6-201ENST00000296581 ARHGEF15O94989 841 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 HLA-DQB2P05538 268 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 RB1P06400 928 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 CLCN4P51793 760 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 SERINC3Q13530 473 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 EFTUD2Q15029 972 aaKnown RBP eCLIP15.84■□□□□ 0.13
LSM6-201ENST00000296581 STEAP4Q687X5 459 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 TXNDC8Q6A555 127 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 RTL10Q7L3V2 364 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 TAOK1Q7L7X3 1001 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 OTOP3Q7RTS5 596 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 CCNJLQ8IV13 435 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 HS6ST3Q8IZP7 471 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 CFAP52Q8N1V2 620 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 ADAMTS19Q8TE59 1207 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 STAMBPL1Q96FJ0 436 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 PPP1R2P1Q96PQ5 205 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 CYP2S1Q96SQ9 504 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 DDX50Q9BQ39 737 aaKnown RBP15.84■□□□□ 0.13
LSM6-201ENST00000296581 LRRC40Q9H9A6 602 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 TRPC7Q9HCX4 862 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 PSMC3IPQ9P2W1 217 aaPredicted RBP15.84■□□□□ 0.13
LSM6-201ENST00000296581 MAD1L1Q9Y6D9 718 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 ZFP37Q9Y6Q3 630 aaPredicted RBP15.84■□□□□ 0.13
LSM6-201ENST00000296581 CAPN7Q9Y6W3 813 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 J3KR12 359 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 GREM1O60565 184 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 IRF1P10914 325 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 HDCP19113 662 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 PRKCHP24723 683 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 SMAD3P84022 425 aaKnown RBP15.84■□□□□ 0.13
LSM6-201ENST00000296581 IL10RBQ08334 325 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 NR1H3Q13133 447 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 ADGRD1Q6QNK2 874 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 ELMOD1Q8N336 334 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 ARL14EPQ8N8R7 260 aaPredicted RBP15.84■□□□□ 0.13
LSM6-201ENST00000296581 ARNTL2Q8WYA1 636 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 MRPS31Q92665 395 aaKnown RBP15.84■□□□□ 0.13
LSM6-201ENST00000296581 TBK1Q9UHD2 729 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 AAR2Q9Y312 384 aaKnown RBP15.84■□□□□ 0.13
LSM6-201ENST00000296581 PCDHA11Q9Y5I1 949 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 ACTL7BQ9Y614 415 aa15.84■□□□□ 0.13
LSM6-201ENST00000296581 CLDN11O75508 207 aa15.83■□□□□ 0.13
LSM6-201ENST00000296581 ANXA9O76027 345 aa15.83■□□□□ 0.13
LSM6-201ENST00000296581 MGAT1P26572 445 aa15.83■□□□□ 0.13
LSM6-201ENST00000296581 CDC25CP30307 473 aa15.83■□□□□ 0.13
LSM6-201ENST00000296581 MDH1P40925 334 aaKnown RBP15.83■□□□□ 0.13
LSM6-201ENST00000296581 RENBPP51606 427 aa15.83■□□□□ 0.13
LSM6-201ENST00000296581 SESN2P58004 480 aaPredicted RBP15.83■□□□□ 0.13
LSM6-201ENST00000296581 CYP4F8P98187 520 aa15.83■□□□□ 0.13
LSM6-201ENST00000296581 CAMK1Q14012 370 aa15.83■□□□□ 0.13
LSM6-201ENST00000296581 TMED2Q15363 201 aa15.83■□□□□ 0.13
LSM6-201ENST00000296581 CYS1Q717R9 158 aa15.83■□□□□ 0.13
LSM6-201ENST00000296581 CHST9Q7L1S5 443 aa15.83■□□□□ 0.13
LSM6-201ENST00000296581 SPRED2Q7Z698 418 aa15.83■□□□□ 0.13
LSM6-201ENST00000296581 TEX26Q8N6G2 289 aa15.83■□□□□ 0.13
LSM6-201ENST00000296581 OR52K1Q8NGK4 314 aa15.83■□□□□ 0.13
LSM6-201ENST00000296581 GSDMBQ8TAX9 411 aa15.83■□□□□ 0.13
LSM6-201ENST00000296581 PAFAH2Q99487 392 aa15.83■□□□□ 0.13
LSM6-201ENST00000296581 NAT9Q9BTE0 207 aa15.83■□□□□ 0.13
LSM6-201ENST00000296581 SP110Q9HB58 689 aa15.83■□□□□ 0.13
LSM6-201ENST00000296581 SMPD4Q9NXE4 827 aa15.83■□□□□ 0.13
LSM6-201ENST00000296581 GBF1Q92538 1859 aa15.83■□□□□ 0.12
LSM6-201ENST00000296581 PFKLP17858 780 aa15.83■□□□□ 0.12
LSM6-201ENST00000296581 CCNHP51946 323 aaPredicted RBP15.83■□□□□ 0.12
LSM6-201ENST00000296581 RPS24P62847 133 aaKnown RBP15.83■□□□□ 0.12
LSM6-201ENST00000296581 SLC7A9P82251 487 aa15.83■□□□□ 0.12
LSM6-201ENST00000296581 OLIG2Q13516 323 aa15.83■□□□□ 0.12
LSM6-201ENST00000296581 KBTBD12Q3ZCT8 623 aa15.83■□□□□ 0.12
LSM6-201ENST00000296581 PPM1LQ5SGD2 360 aa15.83■□□□□ 0.12
LSM6-201ENST00000296581 WLSQ5T9L3 541 aa15.83■□□□□ 0.12
LSM6-201ENST00000296581 NAPEPLDQ6IQ20 393 aa15.83■□□□□ 0.12
LSM6-201ENST00000296581 Q6ZNB5 142 aa15.83■□□□□ 0.12
LSM6-201ENST00000296581 DCAKDQ8WVC6 231 aa15.83■□□□□ 0.12
LSM6-201ENST00000296581 MAGEH1Q9H213 219 aa15.83■□□□□ 0.12
LSM6-201ENST00000296581 ETAA1Q9NY74 926 aa15.83■□□□□ 0.12
LSM6-201ENST00000296581 CPQQ9Y646 472 aa15.83■□□□□ 0.12
LSM6-201ENST00000296581 TTC36A6NLP5 189 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 AP3B1O00203 1094 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 GRM6O15303 877 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 MYOGP15173 224 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 PGAM1P18669 254 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 ACVRL1P37023 503 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 ZXDBP98169 803 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 TTC39BQ5VTQ0 682 aaPredicted RBP15.82■□□□□ 0.12
LSM6-201ENST00000296581 LINC00523Q86TU6 105 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 PRPF39Q86UA1 669 aaKnown RBP15.82■□□□□ 0.12
LSM6-201ENST00000296581 TRABD2AQ86V40 505 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 SLC22A17Q8WUG5 538 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 SLC44A1Q8WWI5 657 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 SYBUQ9NX95 663 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 A0A1B0GVM2 712 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 TCAF2A6NFQ2 919 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 GFRA2O00451 464 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 LPXNO60711 386 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 PRAMEF11O60813 436 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 USP12O75317 370 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 IRS1P35568 1242 aa15.82■□□□□ 0.12
LSM6-201ENST00000296581 MSH2P43246 934 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms