RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 KLHL28Q9NXS3 571 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 LGALS13Q9UHV8 139 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 PADI4Q9UM07 663 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 SF3B1O75533 1304 aaKnown RBP eCLIP11.18□□□□□ -0.628e-6■■■■■ 107
PBRM1-201ENST00000296302 ACKR2O00590 384 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 ZNF7P17097 686 aaPredicted RBP11.18□□□□□ -0.62
PBRM1-201ENST00000296302 CCT3P49368 545 aaKnown RBP11.18□□□□□ -0.62
PBRM1-201ENST00000296302 LPCAT4Q643R3 524 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 PIGWQ7Z7B1 504 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 AMIGO2Q86SJ2 522 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 PSMA8Q8TAA3 256 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 STAG3L4Q8TBR4 150 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 EMILIN2Q9BXX0 1053 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 LRRC4CQ9HCJ2 640 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 ERVK-5Q9HDB9 667 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 BANF1O75531 89 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 FESP07332 822 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 IL1R1P14778 569 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 YBX3P16989 372 aaKnown RBP eCLIP11.18□□□□□ -0.62
PBRM1-201ENST00000296302 HOXB6P17509 224 aaKnown RBP11.18□□□□□ -0.62
PBRM1-201ENST00000296302 VCLP18206 1134 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 PSMB4P28070 264 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 IL12AP29459 219 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 GSSP48637 474 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 GALK1P51570 392 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 CLCN5P51795 746 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 KPNA1P52294 538 aaPredicted RBP11.18□□□□□ -0.62
PBRM1-201ENST00000296302 BNC1Q01954 994 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 ATP13A4Q4VNC1 1196 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 CDC73Q6P1J9 531 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 NEK10Q6ZWH5 1172 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 AGBL3Q8NEM8 1001 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 TSEN34Q9BSV6 310 aaKnown RBP11.18□□□□□ -0.62
PBRM1-201ENST00000296302 EPB41L1Q9H4G0 881 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 ACP6Q9NPH0 428 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 NUDT5Q9UKK9 219 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 TMA7Q9Y2S6 64 aaKnown RBP11.18□□□□□ -0.62
PBRM1-201ENST00000296302 GMPPBQ9Y5P6 360 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 BTN3A1O00481 513 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 PRRG1O14668 218 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 AREL1O15033 823 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 CHRNA5P30532 468 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 NOMO3P69849 1222 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 ZIK1Q3SY52 487 aaPredicted RBP11.18□□□□□ -0.62
PBRM1-201ENST00000296302 FAM47BQ8NA70 645 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 OR52K1Q8NGK4 314 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 CPB2Q96IY4 423 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 MARK4Q96L34 752 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 ZNF670Q9BS34 389 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 EPB41L4BQ9H329 900 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 PTPRHQ9HD43 1115 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 MIEF1Q9NQG6 463 aa11.18□□□□□ -0.62
PBRM1-201ENST00000296302 ATF5Q9Y2D1 282 aaPredicted RBP11.18□□□□□ -0.62
PBRM1-201ENST00000296302 C5orf60A6NFR6 353 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 USP12O75317 370 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 CABYRO75952 493 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 ADRB2P07550 413 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 RXRBP28702 533 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 CDC42P60953 191 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 DENND5AQ6IQ26 1287 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 NPNTQ6UXI9 565 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 KIAA0408Q6ZU52 694 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 C11orf96Q7Z7L8 435 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 DNERQ8NFT8 737 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 SLC44A1Q8WWI5 657 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 L3MBTL3Q96JM7 780 aaPredicted RBP11.17□□□□□ -0.62
PBRM1-201ENST00000296302 TBCDQ9BTW9 1192 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 PIDD1Q9HB75 910 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 MAN1C1Q9NR34 630 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 SH3BP4Q9P0V3 963 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 ARHGAP28Q9P2N2 729 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 PLLPQ9Y342 182 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 A0A087WZ62 844 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 CCDC182A6NF36 153 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 H3BN98 237 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 STX11O75558 287 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 TGFB3P10600 412 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 PPIL2Q13356 520 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 STYK1Q6J9G0 422 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 MZT2AQ6P582 158 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 SPESP1Q6UW49 350 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 IL27RAQ6UWB1 636 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 EFCAB3Q8N7B9 438 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 FDXACB1Q9BRP7 624 aaPredicted RBP11.17□□□□□ -0.62
PBRM1-201ENST00000296302 AHSPQ9NZD4 102 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 RPS6KA6Q9UK32 745 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 CAPN8A6NHC0 703 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 TISP43B9A030 160 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 RAMP2O60895 175 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 EPN2O95208 641 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 RHOCP08134 193 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 PCNAP12004 261 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 EPHA3P29320 983 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 SLC26A3P40879 764 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 CAPZA2P47755 286 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 CDH8P55286 799 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 RHOAP61586 193 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 SNAPC2Q13487 334 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 GALNT15Q8N3T1 639 aa11.17□□□□□ -0.62
PBRM1-201ENST00000296302 SYT15Q9BQS2 421 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms