RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 ARL13AQ5H913 290 aaPredicted RBP17.14■□□□□ 0.34
CHRNE-201ENST00000293780 ISLR2Q6UXK2 745 aa17.14■□□□□ 0.34
CHRNE-201ENST00000293780 SPNS2Q8IVW8 549 aa17.14■□□□□ 0.34
CHRNE-201ENST00000293780 DNAJB3Q8WWF6 145 aa17.14■□□□□ 0.34
CHRNE-201ENST00000293780 GCNAQ96QF7 691 aa17.14■□□□□ 0.34
CHRNE-201ENST00000293780 SPATA16Q9BXB7 569 aa17.14■□□□□ 0.34
CHRNE-201ENST00000293780 UNKQ9C0B0 810 aaKnown RBP17.14■□□□□ 0.34
CHRNE-201ENST00000293780 GBA3Q9H227 469 aa17.14■□□□□ 0.34
CHRNE-201ENST00000293780 JCHAINP01591 159 aa17.14■□□□□ 0.33
CHRNE-201ENST00000293780 USP17L7P0C7H9 530 aa17.14■□□□□ 0.33
CHRNE-201ENST00000293780 CYP2C9P11712 490 aa17.14■□□□□ 0.33
CHRNE-201ENST00000293780 WARSP23381 471 aaKnown RBP17.14■□□□□ 0.33
CHRNE-201ENST00000293780 PNPLA4P41247 253 aa17.14■□□□□ 0.33
CHRNE-201ENST00000293780 NAGLUP54802 743 aa17.14■□□□□ 0.33
CHRNE-201ENST00000293780 UBXN11Q5T124 520 aa17.14■□□□□ 0.33
CHRNE-201ENST00000293780 METTL21CQ5VZV1 264 aa17.14■□□□□ 0.33
CHRNE-201ENST00000293780 OTOP3Q7RTS5 596 aa17.14■□□□□ 0.33
CHRNE-201ENST00000293780 DSELQ8IZU8 1212 aa17.14■□□□□ 0.33
CHRNE-201ENST00000293780 SPATA6LQ8N4H0 392 aa17.14■□□□□ 0.33
CHRNE-201ENST00000293780 USP33Q8TEY7 942 aa17.14■□□□□ 0.33
CHRNE-201ENST00000293780 KCTD13Q8WZ19 329 aa17.14■□□□□ 0.33
CHRNE-201ENST00000293780 CELF6Q96J87 481 aaKnown RBP17.14■□□□□ 0.33
CHRNE-201ENST00000293780 CDRT15Q96T59 188 aa17.14■□□□□ 0.33
CHRNE-201ENST00000293780 C1QTNF1Q9BXJ1 281 aa17.14■□□□□ 0.33
CHRNE-201ENST00000293780 VCX3BQ9H321 246 aa17.14■□□□□ 0.33
CHRNE-201ENST00000293780 TMEM30AQ9NV96 361 aa17.14■□□□□ 0.33
CHRNE-201ENST00000293780 TSC2P49815 1807 aa17.14■□□□□ 0.33
CHRNE-201ENST00000293780 PDCD11Q14690 1871 aaKnown RBP17.14■□□□□ 0.33
CHRNE-201ENST00000293780 CENPFP49454 3210 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 CASQ2O14958 399 aaPredicted RBP17.13■□□□□ 0.33
CHRNE-201ENST00000293780 CFLARO15519 480 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 GRID2O43424 1007 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 TIMM44O43615 452 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 SMIM10L2AP0DMW4 78 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 SMIM10L2BP0DMW5 78 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 NCAM1P13591 858 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 ETS2P15036 469 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 TFEBP19484 476 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 ZNF460Q14592 562 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 PDK3Q15120 406 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 RNF148Q8N7C7 305 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 KCTD4Q8WVF5 259 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 SCYL1Q96KG9 808 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 CATSPER2Q96P56 530 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 ZCWPW1Q9H0M4 648 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 CRTAC1Q9NQ79 661 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 FBXW11Q9UKB1 542 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 RUVBL2Q9Y230 463 aaKnown RBP17.13■□□□□ 0.33
CHRNE-201ENST00000293780 RGSL1A5PLK6 1076 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 FBXO21O94952 628 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 KCNE1P15382 129 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 GABRB3P28472 473 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 ALDH1A3P47895 512 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 RPL14P50914 215 aaKnown RBP17.13■□□□□ 0.33
CHRNE-201ENST00000293780 ATXN3P54252 364 aaPredicted RBP17.13■□□□□ 0.33
CHRNE-201ENST00000293780 FOLH1Q04609 750 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 DUSP28Q4G0W2 176 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 SEL1L3Q68CR1 1132 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 PDZD4Q76G19 769 aaPredicted RBP17.13■□□□□ 0.33
CHRNE-201ENST00000293780 ST13P4Q8IZP2 240 aaPredicted RBP17.13■□□□□ 0.33
CHRNE-201ENST00000293780 SREK1Q8WXA9 508 aaKnown RBP17.13■□□□□ 0.33
CHRNE-201ENST00000293780 EDEM1Q92611 657 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 USP13Q92995 863 aaPredicted RBP17.13■□□□□ 0.33
CHRNE-201ENST00000293780 DRC3Q9H069 523 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 DDIT4Q9NX09 232 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 TBC1D30Q9Y2I9 924 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 RAP2CQ9Y3L5 183 aa17.13■□□□□ 0.33
CHRNE-201ENST00000293780 TIMM13Q9Y5L4 95 aaPredicted RBP17.13■□□□□ 0.33
CHRNE-201ENST00000293780 HDAC3O15379 428 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 THRAP10827 490 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 XRCC1P18887 633 aaPredicted RBP17.12■□□□□ 0.33
CHRNE-201ENST00000293780 THOP1P52888 689 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 CSE1LP55060 971 aaKnown RBP17.12■□□□□ 0.33
CHRNE-201ENST00000293780 PKNOX1P55347 436 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 DAOAP59103 153 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 USP10Q14694 798 aaKnown RBP17.12■□□□□ 0.33
CHRNE-201ENST00000293780 XKR4Q5GH76 650 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 LIPMQ5VYY2 423 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 ZYG11AQ6WRX3 759 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 ZC3HC1Q86WB0 502 aaKnown RBP17.12■□□□□ 0.33
CHRNE-201ENST00000293780 SLC41A1Q8IVJ1 513 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 ICA1LQ8NDH6 482 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 RCN3Q96D15 328 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 SMOQ99835 787 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 STK39Q9UEW8 545 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 TLK1Q9UKI8 766 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 MRPL42Q9Y6G3 142 aaKnown RBP17.12■□□□□ 0.33
CHRNE-201ENST00000293780 RRN3P2A6NIE6 340 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 STX16-NPEPL1H3BU86 382 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 AHSGP02765 367 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 FAM200BP0CF97 657 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 NPY2RP49146 381 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 CSRP3P50461 194 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 MRPS22P82650 360 aaKnown RBP17.12■□□□□ 0.33
CHRNE-201ENST00000293780 FRG1Q14331 258 aaKnown RBP17.12■□□□□ 0.33
CHRNE-201ENST00000293780 SLC5A9Q2M3M2 681 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 ANO4Q32M45 955 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 OGFRL1Q5TC84 451 aaPredicted RBP17.12■□□□□ 0.33
CHRNE-201ENST00000293780 NXNQ6DKJ4 435 aa17.12■□□□□ 0.33
CHRNE-201ENST00000293780 UGT2A3Q6UWM9 527 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms