RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 CCDC162PA2VCL2 907 aa10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 HAT1O14929 419 aa10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 ENTPD5O75356 428 aa10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 SEMA3DO95025 777 aa10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 VAPBO95292 243 aa10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 LSM8O95777 96 aaKnown RBP10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 CDH3P22223 829 aa10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 DENND5AQ6IQ26 1287 aa10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 CES3Q6UWW8 571 aa10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 MILR1Q7Z6M3 343 aa10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 GIPC3Q8TF64 312 aa10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 FBXO32Q969P5 355 aa10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 MYLPFQ96A32 169 aa10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 DGCR14Q96DF8 476 aaKnown RBP10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 ZHX1-C8orf76Q96EF9 292 aa10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 MTG1Q9BT17 334 aaPredicted RBP10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 OSBPL7Q9BZF2 842 aa10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 CISHQ9NSE2 258 aa10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 ZNF222Q9UK12 451 aa10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 VPS28Q9UK41 221 aa10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 PCDHA3Q9Y5H8 950 aa10.9□□□□□ -0.67
PKNOX1-201ENST00000291547 PSMD12O00232 456 aaPredicted RBP10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 NCAM2O15394 837 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 UNC5CO95185 931 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 ECDO95905 644 aaPredicted RBP10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 LTFP02788 710 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 LINGO3P0C6S8 592 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 ZNF37AP17032 561 aaPredicted RBP10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 TRAP1Q12931 704 aaKnown RBP10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 TMEM132BQ14DG7 1078 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 RNF220Q5VTB9 566 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 PGBD2Q6P3X8 592 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 STX12Q86Y82 276 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 DQX1Q8TE96 717 aaKnown RBP10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 MAP3K14Q99558 947 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 TBC1D10AQ9BXI6 508 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 EMILIN2Q9BXX0 1053 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 MAF1Q9H063 256 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 KBTBD4Q9NVX7 518 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 BARX2Q9UMQ3 279 aaPredicted RBP10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 ING4Q9UNL4 249 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 HPSEQ9Y251 543 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 COL22A1Q8NFW1 1626 aaPredicted RBP10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 KRT36O76013 467 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 CYP1A1P04798 512 aaPredicted RBP10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 PAEPP09466 180 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 IFNGR2P38484 337 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 GRIA3P42263 894 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 GPR15P49685 360 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 CELF6Q96J87 481 aaKnown RBP10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 SLC9A7Q96T83 725 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 OSGEPL1Q9H4B0 414 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 ELP3Q9H9T3 547 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 PCP4L1A6NKN8 68 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 CES2O00748 559 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 GARTP22102 1010 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 TKTP29401 623 aaKnown RBP10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 KCNJ2P63252 427 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 PTPN11Q06124 597 aaPredicted RBP10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 EFEMP1Q12805 493 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 LIN52Q52LA3 116 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 MARC1Q5VT66 337 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 RBM44Q6ZP01 1051 aaKnown RBP10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 FAM20CQ8IXL6 584 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 KBTBD8Q8NFY9 601 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 MED8Q96G25 268 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 ZNF570Q96NI8 536 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 KIAA1683Q9H0B3 1180 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 TAS2R13Q9NYV9 303 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 NUDT5Q9UKK9 219 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 PACSIN3Q9UKS6 424 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 SLC12A4Q9UP95 1085 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 LYVE1Q9Y5Y7 322 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 AK5Q9Y6K8 562 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 AGPSO00116 658 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 C2CD2LO14523 706 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 UMPSP11172 480 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 IDO1P14902 403 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 VCLP18206 1134 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 PGAM1P18669 254 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 STARP49675 285 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 TUBA3CQ13748 450 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 ZNF280DQ6N043 979 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 XRRA1Q6P2D8 792 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 C16orf46Q6P387 395 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 ABRAXAS1Q6UWZ7 409 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 KYAT3Q6YP21 454 aaKnown RBP10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 CARNMT1Q8N4J0 409 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 EEF1AKMT1Q8WVE0 214 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 S100A13Q99584 98 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 CPNE1Q99829 537 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 PDCD10Q9BUL8 212 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 PREBQ9HCU5 417 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 ZMYM5Q9UJ78 669 aa10.89□□□□□ -0.67
PKNOX1-201ENST00000291547 C19orf81C9J6K1 198 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 CBX4O00257 560 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 VPS4BO75351 444 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 PSIP1O75475 530 aaKnown RBP10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 RHOCP08134 193 aa10.88□□□□□ -0.67
PKNOX1-201ENST00000291547 SERPINF2P08697 491 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms