RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 DYNLT1P63172 113 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 ARF5P84085 180 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 CREB5Q02930 508 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 KIF5AQ12840 1032 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 SFSWAPQ12872 951 aaKnown RBP6.67□□□□□ -1.34
CD44-204ENST00000279452 MMRN1Q13201 1228 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 SEMA3BQ13214 749 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 CAMK2GQ13555 558 aaPredicted RBP6.67□□□□□ -1.34
CD44-204ENST00000279452 ENPP2Q13822 863 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 ELAVL3Q14576 367 aaKnown RBP6.67□□□□□ -1.34
CD44-204ENST00000279452 CST6Q15828 149 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 CCDC6Q16204 474 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 ATP13A4Q4VNC1 1196 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 LAIR1Q6GTX8 287 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 SLC36A4Q6YBV0 504 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 CYP4V2Q6ZWL3 525 aaPredicted RBP6.67□□□□□ -1.34
CD44-204ENST00000279452 LPCAT2Q7L5N7 544 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 ASCL5Q7RTU5 278 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 DAAM2Q86T65 1068 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 ALYREFQ86V81 257 aaKnown RBP6.67□□□□□ -1.34
CD44-204ENST00000279452 C11orf74Q86VG3 221 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 RHOT1Q8IXI2 618 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 TMEFF1Q8IYR6 380 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 RGL4Q8IZJ4 473 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 ATPAF2Q8N5M1 289 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 FRMD1Q8N878 549 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 KDM1BQ8NB78 822 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 CCDC112Q8NEF3 446 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 OR6K2Q8NGY2 324 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 NSMCE1Q8WV22 266 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 NELL1Q92832 810 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 ARHGEF2Q92974 986 aaKnown RBP6.67□□□□□ -1.34
CD44-204ENST00000279452 ALG14Q96F25 216 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 TOE1Q96GM8 510 aaKnown RBP6.67□□□□□ -1.34
CD44-204ENST00000279452 MYO19Q96H55 970 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 EXOC2Q96KP1 924 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 CSPG4P5Q96PW8 444 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 CINPQ9BW66 212 aaPredicted RBP6.67□□□□□ -1.34
CD44-204ENST00000279452 MAK16Q9BXY0 300 aaKnown RBP6.67□□□□□ -1.34
CD44-204ENST00000279452 EPC1Q9H2F5 836 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 SEMA4AQ9H3S1 761 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 RETREG1Q9H6L5 497 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 ZDHHC6Q9H6R6 413 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 PCDH18Q9HCL0 1135 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 DYRK4Q9NR20 520 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 UBA2Q9UBT2 640 aaPredicted RBP6.67□□□□□ -1.34
CD44-204ENST00000279452 HS3ST2Q9Y278 367 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.67□□□□□ -1.34
CD44-204ENST00000279452 MFHAS1Q9Y4C4 1052 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 OR51B4Q9Y5P0 310 aa6.67□□□□□ -1.34
CD44-204ENST00000279452 A0A0A6YYK5 440 aaPredicted RBP6.66□□□□□ -1.34
CD44-204ENST00000279452 IGHV1OR15-9A0A0B4J2B8 117 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 A0A1W2PP55 124 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 ZSCAN5CA6NGD5 496 aaPredicted RBP6.66□□□□□ -1.34
CD44-204ENST00000279452 WASH4PA8MWX3 477 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 PLK4O00444 970 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 KRIT1O00522 736 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 MID1O15344 667 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 SMAD6O43541 496 aaKnown RBP6.66□□□□□ -1.34
CD44-204ENST00000279452 KDELR3O43731 214 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 ATP9BO43861 1147 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 PALMO75781 387 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 MTA2O94776 668 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 TMCC1O94876 653 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 MAP3K6O95382 1288 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 IGSF6O95976 241 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 ADH1BP00325 375 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 FECHP22830 423 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 OXTRP30559 389 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 SLC8A1P32418 973 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 P2RY2P41231 377 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 SLC1A1P43005 524 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 HCAR3P49019 387 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 PAPOLAP51003 745 aaKnown RBP6.66□□□□□ -1.34
CD44-204ENST00000279452 NDST2P52849 883 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 ZBTB16Q05516 673 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 SLC20A2Q08357 652 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 SPEM2Q0P670 501 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 SERINC3Q13530 473 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 DPYSQ14117 519 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 DPYSL3Q14195 570 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 ZNF235Q14590 738 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 PDK2Q15119 407 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 LLGL1Q15334 1064 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 IFI16Q16666 785 aaKnown RBP6.66□□□□□ -1.34
CD44-204ENST00000279452 MAP7D1Q3KQU3 841 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 PLK5Q496M5 336 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 CFAP58Q5T655 872 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 ATXN7L2Q5T6C5 722 aaPredicted RBP6.66□□□□□ -1.34
CD44-204ENST00000279452 C9orf64Q5T6V5 341 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 FAM46CQ5VWP2 391 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 LYSMD4Q5XG99 296 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 KAZNQ674X7 775 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 CYP2U1Q7Z449 544 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 POLNQ7Z5Q5 900 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 RFX6Q8HWS3 928 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 TMEM139Q8IV31 216 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 UMODL1-AS1Q8N2C9 162 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 HDDC3Q8N4P3 179 aa6.66□□□□□ -1.34
CD44-204ENST00000279452 LZTR1Q8N653 840 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms