RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 RANBP10Q6VN20 620 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 RASSF3Q86WH2 238 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 NDUFAF2Q8N183 169 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 SLC39A11Q8N1S5 342 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 PDZD8Q8NEN9 1154 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 ACMSDQ8TDX5 336 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 MFSD3Q96ES6 412 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 ZNF558Q96NG5 402 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 RPRD1AQ96P16 312 aaPredicted RBP9.76□□□□□ -0.85
TRIM55-201ENST00000276573 CPNE1Q99829 537 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 KIFC1Q9BW19 673 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 SLC13A1Q9BZW2 595 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 IQCGQ9H095 443 aaKnown RBP9.76□□□□□ -0.85
TRIM55-201ENST00000276573 ALG13Q9NP73 1137 aaKnown RBP9.76□□□□□ -0.85
TRIM55-201ENST00000276573 ENTPD7Q9NQZ7 604 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 ZFATQ9P243 1243 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 PSAT1Q9Y617 370 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 CEP350Q5VT06 3117 aa9.76□□□□□ -0.85
TRIM55-201ENST00000276573 ZNF840PA6NDX5 716 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 ACSL4O60488 711 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 NEBLO76041 1014 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 TACR2P21452 398 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 NMBRP28336 390 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 GP5P40197 560 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 SERPINB4P48594 390 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 LIG3P49916 1009 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 YBEYP58557 167 aaPredicted RBP9.75□□□□□ -0.85
TRIM55-201ENST00000276573 PCID2Q5JVF3 399 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 TEDDM1Q5T9Z0 273 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 MARC1Q5VT66 337 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 RNF43Q68DV7 783 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 OTOAQ7RTW8 1153 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 TMCO2Q7Z6W1 182 aaPredicted RBP9.75□□□□□ -0.85
TRIM55-201ENST00000276573 CCDC117Q8IWD4 279 aaPredicted RBP9.75□□□□□ -0.85
TRIM55-201ENST00000276573 C10orf67Q8IYJ2 551 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 TEX26Q8N6G2 289 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 CCDC63Q8NA47 563 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 IPMKQ8NFU5 416 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 MYEOVQ96EZ4 313 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 ZNF333Q96JL9 665 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 MRGPRX2Q96LB1 330 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 ZNF512Q96ME7 567 aaPredicted RBP9.75□□□□□ -0.85
TRIM55-201ENST00000276573 FICDQ9BVA6 458 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 SLC25A51Q9H1U9 297 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 ACTR5Q9H9F9 607 aaPredicted RBP9.75□□□□□ -0.85
TRIM55-201ENST00000276573 CYP4F11Q9HBI6 524 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 WBP1LQ9NX94 342 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 IL1RAPL1Q9NZN1 696 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 NYNRINQ9P2P1 1898 aaKnown RBP9.75□□□□□ -0.85
TRIM55-201ENST00000276573 PMPCBO75439 489 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 FSBPO95073 299 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 GJB5O95377 273 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 TIMP1P01033 207 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 ITGA2BP08514 1039 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 SPRP35270 261 aaPredicted RBP9.75□□□□□ -0.85
TRIM55-201ENST00000276573 DEFB103AP81534 67 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 TNK2Q07912 1038 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 ACTN3Q08043 901 aaPredicted RBP9.75□□□□□ -0.85
TRIM55-201ENST00000276573 IL10RBQ08334 325 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 SLC10A7Q0GE19 358 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 MPP3Q13368 585 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 POLD3Q15054 466 aaPredicted RBP9.75□□□□□ -0.85
TRIM55-201ENST00000276573 LRRC26Q2I0M4 334 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 SPRED3Q2MJR0 410 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 HSP90AA5PQ58FG0 334 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 HECTD3Q5T447 861 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 STXBP5Q5T5C0 1151 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 FAM117BQ6P1L5 589 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 PKN3Q6P5Z2 889 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 KLHDC10Q6PID8 442 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 KDELC1Q6UW63 502 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 CIR1Q86X95 450 aaPredicted RBP9.75□□□□□ -0.85
TRIM55-201ENST00000276573 LGI2Q8N0V4 545 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 PTPRN2Q92932 1015 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 PSMG2Q969U7 264 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 TMEM169Q96HH4 297 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 MYRFLQ96LU7 910 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 HERC2P3Q9BVR0 1158 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 RETREG1Q9H6L5 497 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 RC3H2Q9HBD1 1191 aaKnown RBP9.75□□□□□ -0.85
TRIM55-201ENST00000276573 NT5MQ9NPB1 228 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 ABCF3Q9NUQ8 709 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 PCMTD2Q9NV79 361 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 HAUS2Q9NVX0 235 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 SPG21Q9NZD8 308 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 TRPM5Q9NZQ8 1165 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 KLHL14Q9P2G3 628 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 TXNDC16Q9P2K2 825 aa9.75□□□□□ -0.85
TRIM55-201ENST00000276573 COL4A6Q14031 1691 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 RAMP2O60895 175 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 ALDOAP04075 364 aaKnown RBP9.74□□□□□ -0.85
TRIM55-201ENST00000276573 NEFHP12036 1026 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 BGNP21810 368 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 ITGB8P26012 769 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 OR1E1P30953 314 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 ALDH1A3P47895 512 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 MAPKAPK2P49137 400 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 WNT3AP56704 352 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 PDE1BQ01064 536 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 SERINC3Q13530 473 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms