RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 HERC6Q8IVU3 1022 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 PGAM4Q8N0Y7 254 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 GIPC3Q8TF64 312 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 SREK1Q8WXA9 508 aaKnown RBP13.13□□□□□ -0.31
COL8A1-202ENST00000273342 LPGAT1Q92604 370 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 COPS5Q92905 334 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 TEX13BQ9BXU2 312 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 PAIP1Q9H074 479 aaKnown RBP13.13□□□□□ -0.31
COL8A1-202ENST00000273342 TRPC7Q9HCX4 862 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 MORF4L1Q9UBU8 362 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 AURKCQ9UQB9 309 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 ACKR2O00590 384 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 AKAP10O43572 662 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 XPOTO43592 962 aaKnown RBP13.13□□□□□ -0.31
COL8A1-202ENST00000273342 ONECUT3O60422 494 aaPredicted RBP13.13□□□□□ -0.31
COL8A1-202ENST00000273342 BCAS2O75934 225 aaPredicted RBP13.13□□□□□ -0.31
COL8A1-202ENST00000273342 ZBTB7AO95365 584 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 CBX3Q13185 183 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 IKBKEQ14164 716 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 PPP1R3AQ16821 1122 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 STXBP5Q5T5C0 1151 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 IER5Q5VY09 327 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 ZFP1Q6P2D0 407 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 LCLAT1Q6UWP7 414 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 XKR5Q6UX68 686 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 FASTKD5Q7L8L6 764 aaKnown RBP13.13□□□□□ -0.31
COL8A1-202ENST00000273342 DEFB132Q7Z7B7 95 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 RBM12BQ8IXT5 1001 aaKnown RBP13.13□□□□□ -0.31
COL8A1-202ENST00000273342 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.13□□□□□ -0.31
COL8A1-202ENST00000273342 CATSPER1Q8NEC5 780 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 OR9I1Q8NGQ6 314 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 RMND5BQ96G75 393 aaPredicted RBP13.13□□□□□ -0.31
COL8A1-202ENST00000273342 VPS39Q96JC1 886 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 CPNE1Q99829 537 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 PGAP2Q9UHJ9 254 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 WDR81Q562E7 1941 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 PTPRFP10586 1907 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 TCAF2A6NFQ2 919 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 ACOT8O14734 319 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 H6PDO95479 791 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 PSME3P61289 254 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 MPP3Q13368 585 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 SLC10A6Q3KNW5 377 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 GRTP1Q5TC63 336 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 ZBTB49Q6ZSB9 765 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 FAM83AQ86UY5 434 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 CHERPQ8IWX8 916 aaKnown RBP13.13□□□□□ -0.31
COL8A1-202ENST00000273342 VPS33BQ9H267 617 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 ARMC7Q9H6L4 198 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 OXSMQ9NWU1 459 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 VANGL2Q9ULK5 521 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 MYRFQ9Y2G1 1151 aa13.13□□□□□ -0.31
COL8A1-202ENST00000273342 PRDX6P30041 224 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 LIMK2P53671 638 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 GRM1Q13255 1194 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 INSCQ1MX18 579 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 KIZQ2M2Z5 673 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 DCAF6Q58WW2 860 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 SLC41A1Q8IVJ1 513 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 HAUS8Q9BT25 410 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 OLAHQ9NV23 265 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 RAP2CQ9Y3L5 183 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 A0A087WZ62 844 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 MDM4O15151 490 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 ARIH2O95376 493 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 VTNP04004 478 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 CTBSQ01459 385 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 POU5F1BQ06416 359 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 CTBP1Q13363 440 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 TMEM132DQ14C87 1099 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 DPYSL2Q16555 572 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 SLC44A4Q53GD3 710 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 AGKQ53H12 422 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 METTL21CQ5VZV1 264 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 FAM160B1Q5W0V3 765 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 KCNMB4Q86W47 210 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 FNDC8Q8TC99 324 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 USP33Q8TEY7 942 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 SEPT1Q8WYJ6 367 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 KIF12Q96FN5 646 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 FDXACB1Q9BRP7 624 aaPredicted RBP13.12□□□□□ -0.31
COL8A1-202ENST00000273342 TUT1Q9H6E5 874 aaKnown RBP13.12□□□□□ -0.31
COL8A1-202ENST00000273342 SOX17Q9H6I2 414 aaPredicted RBP13.12□□□□□ -0.31
COL8A1-202ENST00000273342 ZBTB26Q9HCK0 441 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 PTPRHQ9HD43 1115 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 DPP3Q9NY33 737 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 THEGQ9P2T0 379 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 XPR1Q9UBH6 696 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 NME7Q9Y5B8 376 aa13.12□□□□□ -0.31
COL8A1-202ENST00000273342 LY75O60449 1722 aa13.11□□□□□ -0.31
COL8A1-202ENST00000273342 ZNF23P17027 643 aa13.11□□□□□ -0.31
COL8A1-202ENST00000273342 NMBRP28336 390 aa13.11□□□□□ -0.31
COL8A1-202ENST00000273342 MXD4Q14582 209 aaPredicted RBP13.11□□□□□ -0.31
COL8A1-202ENST00000273342 ARID2Q68CP9 1835 aa13.11□□□□□ -0.31
COL8A1-202ENST00000273342 FSTL5Q8N475 847 aaPredicted RBP13.11□□□□□ -0.31
COL8A1-202ENST00000273342 ZNF280CQ8ND82 737 aa13.11□□□□□ -0.31
COL8A1-202ENST00000273342 REPS2Q8NFH8 660 aa13.11□□□□□ -0.31
COL8A1-202ENST00000273342 TEPSINQ96N21 525 aa13.11□□□□□ -0.31
COL8A1-202ENST00000273342 TSNARE1Q96NA8 513 aa13.11□□□□□ -0.31
COL8A1-202ENST00000273342 HACL1Q9UJ83 578 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms