RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 SMPD4Q9NXE4 827 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 ACTL7AQ9Y615 435 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 SCAMP3O14828 347 aaKnown RBP12.35□□□□□ -0.43
SDE2-201ENST00000272091 GJB3O75712 270 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 OR1E1P30953 314 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 NIPAL4Q0D2K0 466 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 PLPP4Q5VZY2 271 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 FOXR1Q6PIV2 292 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 CES3Q6UWW8 571 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 SH2D5Q6ZV89 423 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 IL1RAPL1Q9NZN1 696 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 LZTS1Q9Y250 596 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 PGAM1P18669 254 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 HOXD9P28356 352 aaPredicted RBP12.35□□□□□ -0.43
SDE2-201ENST00000272091 MTA1Q13330 715 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 CRYMQ14894 314 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 POLD3Q15054 466 aaPredicted RBP12.35□□□□□ -0.43
SDE2-201ENST00000272091 STXBP5Q5T5C0 1151 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 FAM109BQ6ICB4 259 aaPredicted RBP12.35□□□□□ -0.43
SDE2-201ENST00000272091 LEKR1Q6ZMV7 388 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 Q6ZNB5 142 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 KREMEN2Q8NCW0 462 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 SLC22A17Q8WUG5 538 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 MRGPRX2Q96LB1 330 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 LRRC40Q9H9A6 602 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 TRPC7Q9HCX4 862 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 SSX2IPQ9Y2D8 614 aa12.35□□□□□ -0.43
SDE2-201ENST00000272091 TTC24A2A3L6 582 aaPredicted RBP12.34□□□□□ -0.43
SDE2-201ENST00000272091 HMX2A2RU54 273 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 RAMP2O60895 175 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 C8AP07357 584 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 IRS1P35568 1242 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 MSH2P43246 934 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 SLC11A2P49281 568 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 CLCN4P51793 760 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 PARP15Q460N3 678 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 KDELC1Q6UW63 502 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 C4orf33Q8N1A6 199 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 TRABDQ9H4I3 376 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 MUSKO15146 869 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 SPAG7O75391 227 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 MBL2P11226 248 aaPredicted RBP12.34□□□□□ -0.43
SDE2-201ENST00000272091 TPH1P17752 444 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 CCR2P41597 374 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 HNRNPDQ14103 355 aaKnown RBP12.34□□□□□ -0.43
SDE2-201ENST00000272091 CYS1Q717R9 158 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 ITIH5Q86UX2 942 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 MRPL43Q8N983 215 aaKnown RBP12.34□□□□□ -0.43
SDE2-201ENST00000272091 POF1BQ8WVV4 589 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 TADA1Q96BN2 335 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 SERAC1Q96JX3 654 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 EPN3Q9H201 632 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 TYROBPO43914 113 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 PRAMEF11O60813 436 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 GABRR2P28476 465 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 MAXP61244 160 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 LRRC14Q15048 493 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 DENND1AQ8TEH3 1009 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 MLXIPLQ9NP71 852 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 ENTPD7Q9NQZ7 604 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 HCFC1R1Q9NWW0 138 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 ASB3Q9Y575 518 aa12.34□□□□□ -0.43
SDE2-201ENST00000272091 ZCWPW2A0A1B0GU75 182 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 GRXCR1A8MXD5 290 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 TSPAN3O60637 253 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 ADH1AP07327 375 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 GJA1P17302 382 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 GLDCP23378 1020 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 CDH4P55283 916 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 IL10RBQ08334 325 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 NR1H3Q13133 447 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 ADGRF1Q5T601 910 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 PPM1NQ8N819 430 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 OR7D4Q8NG98 312 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 IMP4Q96G21 291 aaKnown RBP12.33□□□□□ -0.44
SDE2-201ENST00000272091 TBL1YQ9BQ87 522 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 NT5MQ9NPB1 228 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 YBEYP58557 167 aaPredicted RBP12.33□□□□□ -0.44
SDE2-201ENST00000272091 CXorf57Q6NSI4 855 aaKnown RBP12.33□□□□□ -0.44
SDE2-201ENST00000272091 CASC4Q6P4E1 433 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 TMEM135Q86UB9 458 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 SLC26A11Q86WA9 606 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 ARRDC2Q8TBH0 407 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 NSMCE3Q96MG7 304 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 FICDQ9BVA6 458 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 PPANQ9NQ55 473 aaKnown RBP12.33□□□□□ -0.44
SDE2-201ENST00000272091 GRID1Q9ULK0 1009 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 CPQQ9Y646 472 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 ERICH4A6NGS2 130 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 A6NNZ2 444 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 C5orf67F2Z3F1 127 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 CCL16O15467 120 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 PRPF4O43172 522 aaKnown RBP eCLIP12.33□□□□□ -0.44
SDE2-201ENST00000272091 KRT15P19012 456 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 WDR4P57081 412 aaKnown RBP12.33□□□□□ -0.44
SDE2-201ENST00000272091 SMAD3P84022 425 aaKnown RBP12.33□□□□□ -0.44
SDE2-201ENST00000272091 DSC2Q02487 901 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 SMAD1Q15797 465 aaKnown RBP12.33□□□□□ -0.44
SDE2-201ENST00000272091 ANO4Q32M45 955 aa12.33□□□□□ -0.44
SDE2-201ENST00000272091 TUBB8Q3ZCM7 444 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms