RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 TLK1Q9UKI8 766 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 LZTS1Q9Y250 596 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 HTTP42858 3142 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 XPO1O14980 1071 aaKnown RBP17.1■□□□□ 0.33
SQLE-201ENST00000265896 PTPN9P43378 593 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 HARS2P49590 506 aaKnown RBP17.1■□□□□ 0.33
SQLE-201ENST00000265896 CHN2P52757 468 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 INHBCP55103 352 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 TPI1P60174 286 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 ART3Q13508 389 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 LAMC2Q13753 1193 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 SEPT6Q14141 434 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 TBCCQ15814 346 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 PCSK7Q16549 785 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 CEP97Q8IW35 865 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 NLGN2Q8NFZ4 835 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 B4GALNT2Q8NHY0 566 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 PHF21BQ96EK2 531 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 AP4B1Q9Y6B7 739 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 CDY2AQ9Y6F7 541 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 CDY1Q9Y6F8 540 aa17.1■□□□□ 0.33
SQLE-201ENST00000265896 CRTAMO95727 393 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 CHRNA4P43681 627 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 SERPINB8P50452 374 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 LIMK2P53671 638 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 DGKDQ16760 1214 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 SLC25A52Q3SY17 297 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 KIAA0319Q5VV43 1072 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 SEL1L3Q68CR1 1132 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 UGT2A3Q6UWM9 527 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 FSTL5Q8N475 847 aaPredicted RBP17.09■□□□□ 0.33
SQLE-201ENST00000265896 ARRDC4Q8NCT1 418 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 APPL2Q8NEU8 664 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 BEST2Q8NFU1 509 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 OR9I1Q8NGQ6 314 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 KCNN1Q92952 543 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 CPNE1Q99829 537 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 TNFRSF12AQ9NP84 129 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 SHROOM3Q8TF72 1996 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 SMIM28A0A1B0GU29 152 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 HNRNPRO43390 633 aaKnown RBP17.09■□□□□ 0.33
SQLE-201ENST00000265896 PMPCBO75439 489 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 GABRB3P28472 473 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 ETFBP38117 255 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 NADK2Q4G0N4 442 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 KYQ8NBH2 561 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 DIS3LQ8TF46 1054 aaKnown RBP17.09■□□□□ 0.33
SQLE-201ENST00000265896 HASPINQ8TF76 798 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 DNAJB3Q8WWF6 145 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 CENPIQ92674 756 aaPredicted RBP17.09■□□□□ 0.33
SQLE-201ENST00000265896 ZNF512Q96ME7 567 aaPredicted RBP17.09■□□□□ 0.33
SQLE-201ENST00000265896 C16orf70Q9BSU1 422 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 LRRC40Q9H9A6 602 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 CCDC167Q9P0B6 97 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 GIMAP2Q9UG22 337 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 KIAA1257Q9ULG3 409 aa17.09■□□□□ 0.33
SQLE-201ENST00000265896 GNEQ9Y223 722 aaKnown RBP17.09■□□□□ 0.33
SQLE-201ENST00000265896 FZD9O00144 591 aa17.08■□□□□ 0.33
SQLE-201ENST00000265896 FBXO21O94952 628 aa17.08■□□□□ 0.33
SQLE-201ENST00000265896 SBK3P0C264 359 aa17.08■□□□□ 0.33
SQLE-201ENST00000265896 CYLC2Q14093 348 aaPredicted RBP17.08■□□□□ 0.33
SQLE-201ENST00000265896 SH2D4BQ5SQS7 431 aa17.08■□□□□ 0.33
SQLE-201ENST00000265896 WDR41Q9HAD4 459 aa17.08■□□□□ 0.33
SQLE-201ENST00000265896 PSME4Q14997 1843 aa17.08■□□□□ 0.33
SQLE-201ENST00000265896 TPST1O60507 370 aa17.08■□□□□ 0.32
SQLE-201ENST00000265896 AHSGP02765 367 aa17.08■□□□□ 0.32
SQLE-201ENST00000265896 CNTFP26441 200 aa17.08■□□□□ 0.32
SQLE-201ENST00000265896 FSCBQ5H9T9 825 aa17.08■□□□□ 0.32
SQLE-201ENST00000265896 ESRP1Q6NXG1 681 aaKnown RBP17.08■□□□□ 0.32
SQLE-201ENST00000265896 BNC2Q6ZN30 1099 aaPredicted RBP17.08■□□□□ 0.32
SQLE-201ENST00000265896 MFSD6LQ8IWD5 586 aa17.08■□□□□ 0.32
SQLE-201ENST00000265896 B3GALNT2Q8NCR0 500 aa17.08■□□□□ 0.32
SQLE-201ENST00000265896 RAB3IL1Q8TBN0 382 aa17.08■□□□□ 0.32
SQLE-201ENST00000265896 IRAK4Q9NWZ3 460 aa17.08■□□□□ 0.32
SQLE-201ENST00000265896 DOCK1Q14185 1865 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 GRID2O43424 1007 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 CLPTM1O96005 669 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 PCSK6P29122 969 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 ZNF789Q5FWF6 425 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 GRTP1Q5TC63 336 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 IL23RQ5VWK5 629 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 AAGABQ6PD74 315 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 PSTKQ8IV42 348 aaKnown RBP17.07■□□□□ 0.32
SQLE-201ENST00000265896 ZNF419Q96HQ0 510 aaPredicted RBP17.07■□□□□ 0.32
SQLE-201ENST00000265896 SNX27Q96L92 541 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 SIP14410 1827 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 FYNP06241 537 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 HMGB2P26583 209 aaKnown RBP17.07■□□□□ 0.32
SQLE-201ENST00000265896 SH3D19Q5HYK7 790 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 ARHGAP17Q68EM7 881 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 ACMSDQ8TDX5 336 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 TMIGD2Q96BF3 282 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 FERMT1Q9BQL6 677 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 HUS1O60921 280 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 RNASEH2AO75792 299 aaKnown RBP17.07■□□□□ 0.32
SQLE-201ENST00000265896 TFAP2AP05549 437 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 SMIM18P0DKX4 95 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 KCNA5P22460 613 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 GRM5P41594 1212 aa17.07■□□□□ 0.32
SQLE-201ENST00000265896 RPL14P50914 215 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 347.5 ms