RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 PTGER2P43116 358 aa16.54■□□□□ 0.24
GPC1-201ENST00000264039 CLK1P49759 484 aaKnown RBP16.54■□□□□ 0.24
GPC1-201ENST00000264039 YWHAHQ04917 246 aaPredicted RBP16.54■□□□□ 0.24
GPC1-201ENST00000264039 BAATQ14032 418 aaPredicted RBP16.54■□□□□ 0.24
GPC1-201ENST00000264039 TCEAL1Q15170 157 aa16.54■□□□□ 0.24
GPC1-201ENST00000264039 FIBCD1Q8N539 461 aa16.54■□□□□ 0.24
GPC1-201ENST00000264039 MZB1Q8WU39 189 aa16.54■□□□□ 0.24
GPC1-201ENST00000264039 CNPY3Q9BT09 278 aa16.54■□□□□ 0.24
GPC1-201ENST00000264039 PARVBQ9HBI1 364 aa16.54■□□□□ 0.24
GPC1-201ENST00000264039 PLK2Q9NYY3 685 aa16.54■□□□□ 0.24
GPC1-201ENST00000264039 EI24O14681 340 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 GSTA4O15217 222 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 B4GAT1O43505 415 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 RPS6KA4O75676 772 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 CHEK2O96017 543 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 HSPA1AP0DMV8 641 aaKnown RBP16.53■□□□□ 0.24
GPC1-201ENST00000264039 HSPA1BP0DMV9 641 aaKnown RBP16.53■□□□□ 0.24
GPC1-201ENST00000264039 GSSP48637 474 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 PIGFQ07326 219 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 PMS2P3Q13401 168 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 SLC10A5Q5PT55 438 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 SLCO6A1Q86UG4 719 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 SYTL1Q8IYJ3 562 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 PSD4Q8NDX1 1056 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 NCLNQ969V3 563 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 C6orf62Q9GZU0 229 aaPredicted RBP16.53■□□□□ 0.24
GPC1-201ENST00000264039 AGO4Q9HCK5 861 aaKnown RBP16.53■□□□□ 0.24
GPC1-201ENST00000264039 OAZ3Q9UMX2 235 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 TMED5Q9Y3A6 229 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 RGPD5Q99666 1765 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 NEMP2A6NFY4 417 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 TMEM221A6NGB7 291 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 NADKO95544 446 aaPredicted RBP16.53■□□□□ 0.24
GPC1-201ENST00000264039 CCDC153Q494R4 210 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 Q6ZNX1 250 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 CAND1Q86VP6 1230 aaKnown RBP16.53■□□□□ 0.24
GPC1-201ENST00000264039 GATAD2AQ86YP4 633 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 CLIP4Q8N3C7 705 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 SH3GL1Q99961 368 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 RPF1Q9H9Y2 349 aaKnown RBP16.53■□□□□ 0.24
GPC1-201ENST00000264039 GGA3Q9NZ52 723 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 DSEQ9UL01 958 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 DHRS12A0PJE2 317 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 SERPINB7O75635 380 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 RAB39AQ14964 217 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 SLC39A4Q6P5W5 647 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 CRTC3Q6UUV7 619 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 CERS2Q96G23 380 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 EPB41L1Q9H4G0 881 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 SPAG4Q9NPE6 437 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 HES2Q9Y543 173 aa16.53■□□□□ 0.24
GPC1-201ENST00000264039 LAMB4A4D0S4 1761 aa16.52■□□□□ 0.24
GPC1-201ENST00000264039 ADAM23O75077 832 aa16.52■□□□□ 0.24
GPC1-201ENST00000264039 VNN1O95497 513 aa16.52■□□□□ 0.24
GPC1-201ENST00000264039 ERBB2P04626 1255 aa16.52■□□□□ 0.24
GPC1-201ENST00000264039 ITGB3P05106 788 aa16.52■□□□□ 0.24
GPC1-201ENST00000264039 BOLA3Q53S33 107 aa16.52■□□□□ 0.24
GPC1-201ENST00000264039 PRR5LQ6MZQ0 368 aa16.52■□□□□ 0.24
GPC1-201ENST00000264039 CHSY3Q70JA7 882 aa16.52■□□□□ 0.24
GPC1-201ENST00000264039 PIWIL3Q7Z3Z3 882 aaKnown RBP16.52■□□□□ 0.24
GPC1-201ENST00000264039 TTC30AQ86WT1 665 aa16.52■□□□□ 0.24
GPC1-201ENST00000264039 COQ7Q99807 217 aa16.52■□□□□ 0.24
GPC1-201ENST00000264039 ATXN3LQ9H3M9 355 aa16.52■□□□□ 0.24
GPC1-201ENST00000264039 TNPO2O14787 897 aaKnown RBP16.52■□□□□ 0.23
GPC1-201ENST00000264039 TADA2AO75478 443 aa16.52■□□□□ 0.23
GPC1-201ENST00000264039 NCK1P16333 377 aa16.52■□□□□ 0.23
GPC1-201ENST00000264039 CNTFP26441 200 aa16.52■□□□□ 0.23
GPC1-201ENST00000264039 ADSLP30566 484 aaPredicted RBP16.52■□□□□ 0.23
GPC1-201ENST00000264039 SCARA3Q6AZY7 606 aa16.52■□□□□ 0.23
GPC1-201ENST00000264039 PGM2L1Q6PCE3 622 aa16.52■□□□□ 0.23
GPC1-201ENST00000264039 TRAF7Q6Q0C0 670 aa16.52■□□□□ 0.23
GPC1-201ENST00000264039 XPR1Q9UBH6 696 aa16.52■□□□□ 0.23
GPC1-201ENST00000264039 PCDHGC3Q9UN70 934 aa16.52■□□□□ 0.23
GPC1-201ENST00000264039 RNF11Q9Y3C5 154 aa16.52■□□□□ 0.23
GPC1-201ENST00000264039 FBXO21O94952 628 aa16.52■□□□□ 0.23
GPC1-201ENST00000264039 CCDC159P0C7I6 412 aa16.52■□□□□ 0.23
GPC1-201ENST00000264039 MAPTP10636 758 aaKnown RBP16.52■□□□□ 0.23
GPC1-201ENST00000264039 CD247P20963 164 aa16.52■□□□□ 0.23
GPC1-201ENST00000264039 ATXN1P54253 815 aaKnown RBP16.52■□□□□ 0.23
GPC1-201ENST00000264039 ARPC4P59998 168 aa16.52■□□□□ 0.23
GPC1-201ENST00000264039 C6orf10Q5SRN2 563 aa16.52■□□□□ 0.23
GPC1-201ENST00000264039 APOBEC3HQ6NTF7 200 aaKnown RBP16.52■□□□□ 0.23
GPC1-201ENST00000264039 TUBGCP3Q96CW5 907 aa16.52■□□□□ 0.23
GPC1-201ENST00000264039 MFSD3Q96ES6 412 aa16.52■□□□□ 0.23
GPC1-201ENST00000264039 CITED4Q96RK1 184 aa16.52■□□□□ 0.23
GPC1-201ENST00000264039 CGRRF1Q99675 332 aa16.52■□□□□ 0.23
GPC1-201ENST00000264039 SNRNP25Q9BV90 132 aaKnown RBP16.52■□□□□ 0.23
GPC1-201ENST00000264039 REXO4Q9GZR2 422 aaKnown RBP16.52■□□□□ 0.23
GPC1-201ENST00000264039 PCDHB12Q9Y5F1 795 aa16.52■□□□□ 0.23
GPC1-201ENST00000264039 PDE4DIPQ5VU43 2346 aa16.51■□□□□ 0.23
GPC1-201ENST00000264039 TRIM64CA6NLI5 447 aa16.51■□□□□ 0.23
GPC1-201ENST00000264039 RNF103O00237 685 aa16.51■□□□□ 0.23
GPC1-201ENST00000264039 SNNO75324 88 aaPredicted RBP16.51■□□□□ 0.23
GPC1-201ENST00000264039 C4BPAP04003 597 aaKnown RBP16.51■□□□□ 0.23
GPC1-201ENST00000264039 ALOX12P18054 663 aa16.51■□□□□ 0.23
GPC1-201ENST00000264039 SFNP31947 248 aa16.51■□□□□ 0.23
GPC1-201ENST00000264039 COPZ1P61923 177 aa16.51■□□□□ 0.23
GPC1-201ENST00000264039 CA9Q16790 459 aa16.51■□□□□ 0.23
GPC1-201ENST00000264039 SAMD4BQ5PRF9 694 aaKnown RBP16.51■□□□□ 0.23
GPC1-201ENST00000264039 GPR180Q86V85 440 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms