RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 CACNA1HO95180 2353 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 USP34Q70CQ2 3546 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 CCDC66A2RUB6 948 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 J3KR12 359 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 DDX3YO15523 660 aaKnown RBP18.73■□□□□ 0.59
SDF4-201ENST00000263741 LAMTOR5O43504 91 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 ATG13O75143 517 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 CXCL12P48061 93 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 ST8SIA6P61647 398 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 DMWDQ09019 674 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 SERINC3Q13530 473 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 PARP15Q460N3 678 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 DCAF12L1Q5VU92 463 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 NPNTQ6UXI9 565 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 TRMT11Q7Z4G4 463 aaKnown RBP18.73■□□□□ 0.59
SDF4-201ENST00000263741 CCDC26Q8TAB7 109 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 KCNV2Q8TDN2 545 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 ALS2CR12Q96Q35 445 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 GABRG3Q99928 467 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 RETREG1Q9H6L5 497 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 FCF1Q9Y324 198 aaKnown RBP18.73■□□□□ 0.59
SDF4-201ENST00000263741 TCRBV21S2A2A0A5A6 115 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 BNIP3LO60238 219 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 CD160O95971 181 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 SRCP12931 536 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 CCR3P51677 355 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 NDST2P52849 883 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 YBEYP58557 167 aaPredicted RBP18.72■□□□□ 0.59
SDF4-201ENST00000263741 ETF1P62495 437 aaKnown RBP18.72■□□□□ 0.59
SDF4-201ENST00000263741 SULT2A1Q06520 285 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 ENPP2Q13822 863 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 ACCSLQ4AC99 568 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 HEATR6Q6AI08 1181 aaKnown RBP18.72■□□□□ 0.59
SDF4-201ENST00000263741 SDE2Q6IQ49 451 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 ANO7Q6IWH7 933 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 PLD5Q8N7P1 536 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 ATP11CQ8NB49 1132 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.72■□□□□ 0.59
SDF4-201ENST00000263741 HEMGNQ9BXL5 484 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 SLC8A2Q9UPR5 921 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 K7ESF4 209 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 ZRANB2O95218 330 aaKnown RBP eCLIP18.72■□□□□ 0.59
SDF4-201ENST00000263741 SRPRAP08240 638 aaKnown RBP18.72■□□□□ 0.59
SDF4-201ENST00000263741 ETFBP38117 255 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 ELF2Q15723 593 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 FAM182AQ5T1J6 154 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 Q6ZVU0 165 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 SH2D3CQ8N5H7 860 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 EXD1Q8NHP7 514 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 HES6Q96HZ4 224 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 TNKS2Q9H2K2 1166 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 PRMT8Q9NR22 394 aaPredicted RBP18.72■□□□□ 0.59
SDF4-201ENST00000263741 SAE1Q9UBE0 346 aaPredicted RBP18.72■□□□□ 0.59
SDF4-201ENST00000263741 HEY1Q9Y5J3 304 aa18.72■□□□□ 0.59
SDF4-201ENST00000263741 NUMA1Q14980 2115 aa18.71■□□□□ 0.59
SDF4-201ENST00000263741 hCG_1818297A0A087WSY0 165 aa18.71■□□□□ 0.59
SDF4-201ENST00000263741 KDELR3O43731 214 aa18.71■□□□□ 0.59
SDF4-201ENST00000263741 PYGMP11217 842 aa18.71■□□□□ 0.59
SDF4-201ENST00000263741 SERPINH1P50454 418 aaKnown RBP18.71■□□□□ 0.59
SDF4-201ENST00000263741 RWDD2BP57060 319 aa18.71■□□□□ 0.59
SDF4-201ENST00000263741 CSTF1Q05048 431 aaKnown RBP18.71■□□□□ 0.59
SDF4-201ENST00000263741 SLC10A2Q12908 348 aaPredicted RBP18.71■□□□□ 0.59
SDF4-201ENST00000263741 ANGPT1Q15389 498 aa18.71■□□□□ 0.59
SDF4-201ENST00000263741 HMGB4Q8WW32 186 aa18.71■□□□□ 0.59
SDF4-201ENST00000263741 HAUS1Q96CS2 278 aa18.71■□□□□ 0.59
SDF4-201ENST00000263741 IER2Q9BTL4 223 aa18.71■□□□□ 0.59
SDF4-201ENST00000263741 CD248Q9HCU0 757 aa18.71■□□□□ 0.59
SDF4-201ENST00000263741 HPCAL4Q9UM19 191 aa18.71■□□□□ 0.59
SDF4-201ENST00000263741 HS3ST2Q9Y278 367 aa18.71■□□□□ 0.59
SDF4-201ENST00000263741 FANCMQ8IYD8 2048 aa18.71■□□□□ 0.59
SDF4-201ENST00000263741 ARHGAP42A6NI28 874 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 APOL1O14791 398 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 SIN3BO75182 1162 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 SERPINB6P35237 376 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 NAA30Q147X3 362 aaPredicted RBP18.7■□□□□ 0.58
SDF4-201ENST00000263741 PAFAH1B3Q15102 231 aaKnown RBP18.7■□□□□ 0.58
SDF4-201ENST00000263741 DLG2Q15700 870 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 TAZQ16635 292 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 HSF5Q4G112 596 aaPredicted RBP18.7■□□□□ 0.58
SDF4-201ENST00000263741 TFDP3Q5H9I0 405 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 SLC9A4Q6AI14 798 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 B4GALNT4Q76KP1 1039 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 RCOR2Q8IZ40 523 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 TSTD1Q8NFU3 115 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 FRS2Q8WU20 508 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 RBM41Q96IZ5 413 aaKnown RBP18.7■□□□□ 0.58
SDF4-201ENST00000263741 MAK16Q9BXY0 300 aaKnown RBP18.7■□□□□ 0.58
SDF4-201ENST00000263741 SP110Q9HB58 689 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 PDFQ9HBH1 243 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 CST8O60676 142 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 PECAM1P16284 738 aaPredicted RBP18.7■□□□□ 0.58
SDF4-201ENST00000263741 HNRNPA1L2Q32P51 320 aaKnown RBP18.7■□□□□ 0.58
SDF4-201ENST00000263741 MEI1Q5TIA1 1274 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 RETSATQ6NUM9 610 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 C22orf39Q6P5X5 142 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 UBL4BQ8N7F7 174 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 MDGA1Q8NFP4 955 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 TRIM58Q8NG06 486 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 TPSD1Q9BZJ3 242 aa18.7■□□□□ 0.58
SDF4-201ENST00000263741 TM6SF2Q9BZW4 377 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms