RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 TYW5A2RUC4 315 aaKnown RBP23.34■■□□□ 1.33
SMARCB1-201ENST00000263121 IFFO1Q0D2I5 559 aa23.34■■□□□ 1.33
SMARCB1-201ENST00000263121 CCDC38Q502W7 563 aa23.34■■□□□ 1.33
SMARCB1-201ENST00000263121 TMC5Q6UXY8 1006 aa23.34■■□□□ 1.33
SMARCB1-201ENST00000263121 ZNF783Q6ZMS7 281 aa23.34■■□□□ 1.33
SMARCB1-201ENST00000263121 OTOP3Q7RTS5 596 aa23.34■■□□□ 1.33
SMARCB1-201ENST00000263121 TDRD5Q8NAT2 981 aaKnown RBP23.34■■□□□ 1.33
SMARCB1-201ENST00000263121 FBXO36Q8NEA4 188 aa23.34■■□□□ 1.33
SMARCB1-201ENST00000263121 TTC16Q8NEE8 873 aa23.34■■□□□ 1.33
SMARCB1-201ENST00000263121 PYROXD1Q8WU10 500 aa23.34■■□□□ 1.33
SMARCB1-201ENST00000263121 MRPS23Q9Y3D9 190 aaKnown RBP23.34■■□□□ 1.33
SMARCB1-201ENST00000263121 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.34■■□□□ 1.33
SMARCB1-201ENST00000263121 LUC7L3O95232 432 aaKnown RBP23.33■■□□□ 1.33
SMARCB1-201ENST00000263121 PRAMEF12O95522 483 aa23.33■■□□□ 1.33
SMARCB1-201ENST00000263121 TCF3P15923 654 aa23.33■■□□□ 1.33
SMARCB1-201ENST00000263121 OAS2P29728 719 aaKnown RBP23.33■■□□□ 1.33
SMARCB1-201ENST00000263121 ELK3P41970 407 aa23.33■■□□□ 1.33
SMARCB1-201ENST00000263121 SLC10A7Q0GE19 358 aa23.33■■□□□ 1.33
SMARCB1-201ENST00000263121 PRPSAP1Q14558 356 aa23.33■■□□□ 1.33
SMARCB1-201ENST00000263121 DNAJC21Q5F1R6 531 aaKnown RBP23.33■■□□□ 1.33
SMARCB1-201ENST00000263121 MARC1Q5VT66 337 aa23.33■■□□□ 1.33
SMARCB1-201ENST00000263121 LRRC8BQ6P9F7 803 aa23.33■■□□□ 1.33
SMARCB1-201ENST00000263121 IGDCC3Q8IVU1 814 aa23.33■■□□□ 1.33
SMARCB1-201ENST00000263121 PPP2R3CQ969Q6 453 aa23.33■■□□□ 1.33
SMARCB1-201ENST00000263121 LRRC39Q96DD0 335 aa23.33■■□□□ 1.33
SMARCB1-201ENST00000263121 PABPC5Q96DU9 382 aaKnown RBP23.33■■□□□ 1.33
SMARCB1-201ENST00000263121 OXNAD1Q96HP4 312 aaPredicted RBP23.33■■□□□ 1.33
SMARCB1-201ENST00000263121 ZSWIM3Q96MP5 696 aa23.33■■□□□ 1.33
SMARCB1-201ENST00000263121 ZNF599Q96NL3 588 aa23.33■■□□□ 1.33
SMARCB1-201ENST00000263121 ACE2Q9BYF1 805 aaPredicted RBP23.33■■□□□ 1.33
SMARCB1-201ENST00000263121 TSHRP16473 764 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 GPX6P59796 221 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 MPP7Q5T2T1 576 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 RNF43Q68DV7 783 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 ATP11CQ8NB49 1132 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 ITFG1Q8TB96 612 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 NSMCE1Q8WV22 266 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 ING5Q8WYH8 240 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 PPP1R2P1Q96PQ5 205 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 TMBIM4Q9HC24 238 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 CHMP2BQ9UQN3 213 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 KDELR3O43731 214 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 ETFBP38117 255 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 MMP13P45452 471 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 USP4Q13107 963 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 ZNF77Q15935 545 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 MPPE1Q53F39 396 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 TMCO4Q5TGY1 634 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 TMEM184AQ6ZMB5 413 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 CARNMT1Q8N4J0 409 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 GOLGA6L1Q8N7Z2 621 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 ARL8AQ96BM9 186 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 SIGLEC10Q96LC7 697 aa23.32■■□□□ 1.32
SMARCB1-201ENST00000263121 LAMA3Q16787 3333 aa23.31■■□□□ 1.32
SMARCB1-201ENST00000263121 A0A087WUV0 522 aaPredicted RBP23.31■■□□□ 1.32
SMARCB1-201ENST00000263121 GOLGA8KD6RF30 607 aa23.31■■□□□ 1.32
SMARCB1-201ENST00000263121 H0Y626 953 aa23.31■■□□□ 1.32
SMARCB1-201ENST00000263121 PSMD3O43242 534 aa23.31■■□□□ 1.32
SMARCB1-201ENST00000263121 NEBLO76041 1014 aa23.31■■□□□ 1.32
SMARCB1-201ENST00000263121 GLP2RO95838 553 aa23.31■■□□□ 1.32
SMARCB1-201ENST00000263121 MYZAPP0CAP1 466 aa23.31■■□□□ 1.32
SMARCB1-201ENST00000263121 SPARCL1Q14515 664 aa23.31■■□□□ 1.32
SMARCB1-201ENST00000263121 LBRQ14739 615 aaKnown RBP23.31■■□□□ 1.32
SMARCB1-201ENST00000263121 FSCBQ5H9T9 825 aa23.31■■□□□ 1.32
SMARCB1-201ENST00000263121 RNF219Q5W0B1 726 aaPredicted RBP23.31■■□□□ 1.32
SMARCB1-201ENST00000263121 IL31Q6EBC2 164 aa23.31■■□□□ 1.32
SMARCB1-201ENST00000263121 PKNOX2Q96KN3 472 aa23.31■■□□□ 1.32
SMARCB1-201ENST00000263121 LRRC40Q9H9A6 602 aa23.31■■□□□ 1.32
SMARCB1-201ENST00000263121 AAR2Q9Y312 384 aaKnown RBP23.31■■□□□ 1.32
SMARCB1-201ENST00000263121 TTLL3Q9Y4R7 772 aa23.31■■□□□ 1.32
SMARCB1-201ENST00000263121 C2orf16Q68DN1 1984 aa23.31■■□□□ 1.32
SMARCB1-201ENST00000263121 GOLGA6CA6NDK9 693 aa23.3■■□□□ 1.32
SMARCB1-201ENST00000263121 TCEA3O75764 348 aa23.3■■□□□ 1.32
SMARCB1-201ENST00000263121 ANXA9O76027 345 aa23.3■■□□□ 1.32
SMARCB1-201ENST00000263121 GOLGA6DP0CG33 693 aa23.3■■□□□ 1.32
SMARCB1-201ENST00000263121 OXCT1P55809 520 aa23.3■■□□□ 1.32
SMARCB1-201ENST00000263121 KRT71Q3SY84 523 aa23.3■■□□□ 1.32
SMARCB1-201ENST00000263121 TTMPQ5BVD1 217 aa23.3■■□□□ 1.32
SMARCB1-201ENST00000263121 SPATA22Q8NHS9 363 aa23.3■■□□□ 1.32
SMARCB1-201ENST00000263121 SPON2Q9BUD6 331 aa23.3■■□□□ 1.32
SMARCB1-201ENST00000263121 ROPN1BQ9BZX4 212 aaPredicted RBP23.3■■□□□ 1.32
SMARCB1-201ENST00000263121 SLC25A51Q9H1U9 297 aa23.3■■□□□ 1.32
SMARCB1-201ENST00000263121 NSUN3Q9H649 340 aaKnown RBP23.3■■□□□ 1.32
SMARCB1-201ENST00000263121 IGFLR1Q9H665 355 aa23.3■■□□□ 1.32
SMARCB1-201ENST00000263121 VPS37BQ9H9H4 285 aa23.3■■□□□ 1.32
SMARCB1-201ENST00000263121 ROPN1Q9HAT0 212 aaPredicted RBP23.3■■□□□ 1.32
SMARCB1-201ENST00000263121 ATP13A1Q9HD20 1204 aa23.3■■□□□ 1.32
SMARCB1-201ENST00000263121 NT5MQ9NPB1 228 aa23.3■■□□□ 1.32
SMARCB1-201ENST00000263121 CASS4Q9NQ75 786 aa23.3■■□□□ 1.32
SMARCB1-201ENST00000263121 GOLGA6AQ9NYA3 693 aa23.3■■□□□ 1.32
SMARCB1-201ENST00000263121 NUP210Q8TEM1 1887 aaPredicted RBP23.3■■□□□ 1.32
SMARCB1-201ENST00000263121 GOLGA6L10A6NI86 522 aa23.29■■□□□ 1.32
SMARCB1-201ENST00000263121 RNF40O75150 1001 aa23.29■■□□□ 1.32
SMARCB1-201ENST00000263121 WEE1P30291 646 aa23.29■■□□□ 1.32
SMARCB1-201ENST00000263121 HYAL1Q12794 435 aa23.29■■□□□ 1.32
SMARCB1-201ENST00000263121 OLIG2Q13516 323 aa23.29■■□□□ 1.32
SMARCB1-201ENST00000263121 STAT4Q14765 748 aa23.29■■□□□ 1.32
SMARCB1-201ENST00000263121 CROCCP2Q86T23 111 aa23.29■■□□□ 1.32
SMARCB1-201ENST00000263121 ARID3BQ8IVW6 561 aaPredicted RBP23.29■■□□□ 1.32
SMARCB1-201ENST00000263121 PALM2Q8IXS6 379 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms