RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 CCDC77Q9BR77 488 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 ROPN1BQ9BZX4 212 aaPredicted RBP13.27□□□□□ -0.29
VAMP7-201ENST00000262640 SMG9Q9H0W8 520 aaKnown RBP13.27□□□□□ -0.29
VAMP7-201ENST00000262640 ROPN1Q9HAT0 212 aaPredicted RBP13.27□□□□□ -0.29
VAMP7-201ENST00000262640 LRRC4CQ9HCJ2 640 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 AAR2Q9Y312 384 aaKnown RBP13.27□□□□□ -0.29
VAMP7-201ENST00000262640 TEX264Q9Y6I9 313 aa13.27□□□□□ -0.29
VAMP7-201ENST00000262640 A0A0D9SEW6 157 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 AVILO75366 819 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 LUC7L3O95232 432 aaKnown RBP13.26□□□□□ -0.29
VAMP7-201ENST00000262640 HLA-DQB2P05538 268 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 TCF3P15923 654 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 CEBPBP17676 345 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 HOXD9P28356 352 aaPredicted RBP13.26□□□□□ -0.29
VAMP7-201ENST00000262640 PHBP35232 272 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 ELK3P41970 407 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 KRT71Q3SY84 523 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 MPPE1Q53F39 396 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 MPP7Q5T2T1 576 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 TMCO4Q5TGY1 634 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 KCTD11Q693B1 232 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 IL31Q6EBC2 164 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 CXorf57Q6NSI4 855 aaKnown RBP13.26□□□□□ -0.29
VAMP7-201ENST00000262640 OTOP3Q7RTS5 596 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 PALM2Q8IXS6 379 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 C12orf76Q8N812 135 aaPredicted RBP13.26□□□□□ -0.29
VAMP7-201ENST00000262640 VN1R2Q8NFZ6 395 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 OR7D4Q8NG98 312 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 OR52K2Q8NGK3 314 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 ZNF419Q96HQ0 510 aaPredicted RBP13.26□□□□□ -0.29
VAMP7-201ENST00000262640 WDR83Q9BRX9 315 aaKnown RBP13.26□□□□□ -0.29
VAMP7-201ENST00000262640 MLPHQ9BV36 600 aaPredicted RBP13.26□□□□□ -0.29
VAMP7-201ENST00000262640 LRRC40Q9H9A6 602 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 VPS37BQ9H9H4 285 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 PDFQ9HBH1 243 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 TMBIM4Q9HC24 238 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 CHMP2BQ9UQN3 213 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 CCL26Q9Y258 94 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 TTLL3Q9Y4R7 772 aa13.26□□□□□ -0.29
VAMP7-201ENST00000262640 H0Y626 953 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 KDELR3O43731 214 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 MMP13P45452 471 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 GEMP55040 296 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 OXCT1P55809 520 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 LBRQ14739 615 aaKnown RBP13.25□□□□□ -0.29
VAMP7-201ENST00000262640 STAT4Q14765 748 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 TMC5Q6UXY8 1006 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 CARNMT1Q8N4J0 409 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 ACE2Q9BYF1 805 aaPredicted RBP13.25□□□□□ -0.29
VAMP7-201ENST00000262640 HAUS2Q9NVX0 235 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 CEP290O15078 2479 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 RFXAPO00287 272 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 RNF40O75150 1001 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 SPAG6O75602 509 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 TCEA3O75764 348 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 IVLP07476 585 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 GRIA1P42261 906 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 SLC10A7Q0GE19 358 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 MTM1Q13496 603 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 RNF219Q5W0B1 726 aaPredicted RBP13.25□□□□□ -0.29
VAMP7-201ENST00000262640 DDI1Q8WTU0 396 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 OXNAD1Q96HP4 312 aaPredicted RBP13.25□□□□□ -0.29
VAMP7-201ENST00000262640 SPON2Q9BUD6 331 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 MUC3BQ9H195 1237 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 SLC25A51Q9H1U9 297 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 ATP13A1Q9HD20 1204 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 NT5MQ9NPB1 228 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 MYO7AQ13402 2215 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 SHROOM3Q8TF72 1996 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 ATG2AQ2TAZ0 1938 aa13.25□□□□□ -0.29
VAMP7-201ENST00000262640 AP3B1O00203 1094 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 PRAMEF12O95522 483 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 CPP00450 1065 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 CYBBP04839 570 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 WEE1P30291 646 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 GPX6P59796 221 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 USP4Q13107 963 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 CDH18Q13634 790 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 SPARCL1Q14515 664 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 ZNF77Q15935 545 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 NAPEPLDQ6IQ20 393 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 LINC00523Q86TU6 105 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 IGDCC3Q8IVU1 814 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 CCDC117Q8IWD4 279 aaPredicted RBP13.24□□□□□ -0.29
VAMP7-201ENST00000262640 BBS5Q8N3I7 341 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 ING5Q8WYH8 240 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 ARL8AQ96BM9 186 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 SIGLEC10Q96LC7 697 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 NSUN3Q9H649 340 aaKnown RBP13.24□□□□□ -0.29
VAMP7-201ENST00000262640 TBC1D14Q9P2M4 693 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 HELZP42694 1942 aaKnown RBP13.24□□□□□ -0.29
VAMP7-201ENST00000262640 SDR42E2A6NKP2 422 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 RASGRF2O14827 1237 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 GSTA2P09210 222 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 RFTN1Q14699 578 aaPredicted RBP13.24□□□□□ -0.29
VAMP7-201ENST00000262640 AGBL2Q5U5Z8 902 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 RNF43Q68DV7 783 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 TMEM184AQ6ZMB5 413 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 MFN1Q8IWA4 741 aa13.24□□□□□ -0.29
VAMP7-201ENST00000262640 AGGF1Q8N302 714 aaeCLIP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms