RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 ADCY4Q8NFM4 1077 aa17.76■□□□□ 0.43
TRAM1-201ENST00000262213 GRIN3AQ8TCU5 1115 aa17.76■□□□□ 0.43
TRAM1-201ENST00000262213 FAM72CH0Y354 149 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 M0QYT0 321 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 SOCS7O14512 581 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 PENKP01210 267 aaPredicted RBP17.75■□□□□ 0.43
TRAM1-201ENST00000262213 NMBRP28336 390 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 MAGEA12P43365 314 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 HPCAP84074 193 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 TMED1Q13445 227 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 PTK2BQ14289 1009 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 MYBPC3Q14896 1274 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 FAM72AQ5TYM5 149 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 FAM72DQ6L9T8 149 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 ZFP1Q6P2D0 407 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 FAM72BQ86X60 149 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 PGAM4Q8N0Y7 254 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 TMIGD2Q96BF3 282 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 ZNF512Q96ME7 567 aaPredicted RBP17.75■□□□□ 0.43
TRAM1-201ENST00000262213 RBM38Q9H0Z9 239 aaKnown RBP17.75■□□□□ 0.43
TRAM1-201ENST00000262213 EFCAB1Q9HAE3 211 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 DMTF1Q9Y222 760 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 IRF6O14896 467 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 STRNO43815 780 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 HDCP19113 662 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 PTPN3P26045 913 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 SLC5A2P31639 672 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 GLUD2P49448 558 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 GALK1P51570 392 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 TMEM259Q4ZIN3 620 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 LIPMQ5VYY2 423 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 ZDHHC17Q8IUH5 632 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 PSTKQ8IV42 348 aaKnown RBP17.75■□□□□ 0.43
TRAM1-201ENST00000262213 SLC41A1Q8IVJ1 513 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 CATSPER1Q8NEC5 780 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 TRPV6Q9H1D0 765 aa17.75■□□□□ 0.43
TRAM1-201ENST00000262213 COPG1Q9Y678 874 aaKnown RBP17.75■□□□□ 0.43
TRAM1-201ENST00000262213 KCNU1A8MYU2 1149 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 TSPAN1O60635 241 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 ZNF286BP0CG31 522 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 PSMC3P17980 439 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 NUMBP49757 651 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 NDUFV1P49821 464 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 RALGDSQ12967 914 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 LAYNQ6UX15 382 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 CYP2R1Q6VVX0 501 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 TTC39CQ8N584 583 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 TRIML2Q8N7C3 387 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 DRC3Q9H069 523 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 CAAP1Q9H8G2 361 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 GTSE1Q9NYZ3 720 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 SBK3P0C264 359 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 CDK4P11802 303 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 MATKP42679 507 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 BCAT1P54687 386 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 KIZQ2M2Z5 673 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 SYPL2Q5VXT5 272 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 TICAM1Q8IUC6 712 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 ANKRD52Q8NB46 1076 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 LRTOMTQ8WZ04 291 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 CCT7Q99832 543 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 ZNF696Q9H7X3 374 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 COQ10BQ9H8M1 238 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 BCAP29Q9UHQ4 241 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 MRPL42Q9Y6G3 142 aaKnown RBP17.74■□□□□ 0.43
TRAM1-201ENST00000262213 SHROOM3Q8TF72 1996 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 CLDN5O00501 218 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 BCAS2O75934 225 aaPredicted RBP17.74■□□□□ 0.43
TRAM1-201ENST00000262213 DGKDQ16760 1214 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 ZYG11AQ6WRX3 759 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 MYO1HQ8N1T3 1032 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 USP33Q8TEY7 942 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 CNDP1Q96KN2 507 aa17.74■□□□□ 0.43
TRAM1-201ENST00000262213 PPP1R1BQ9UD71 204 aaPredicted RBP17.74■□□□□ 0.43
TRAM1-201ENST00000262213 PRSS51A0A1B0GVH4 220 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 ARHGAP10A1A4S6 786 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 PDLIM1O00151 329 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 TIMM44O43615 452 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 AP2A1O95782 977 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 GNL1P36915 607 aaPredicted RBP17.73■□□□□ 0.43
TRAM1-201ENST00000262213 PRKAA1Q13131 559 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 TMEM135Q86UB9 458 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 FSTL5Q8N475 847 aaPredicted RBP17.73■□□□□ 0.43
TRAM1-201ENST00000262213 TMEM102Q8N9M5 508 aaPredicted RBP17.73■□□□□ 0.43
TRAM1-201ENST00000262213 ZBTB26Q9HCK0 441 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 ERAP1Q9NZ08 941 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 IGSF9Q9P2J2 1179 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 XPR1Q9UBH6 696 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 SNX13Q9Y5W8 968 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 SNX10Q9Y5X0 201 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 C7orf72A4D263 438 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 HNRNPLP14866 589 aaKnown RBP eCLIP17.73■□□□□ 0.43
TRAM1-201ENST00000262213 ERCC2P18074 760 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 NFKB1P19838 968 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 RPL10P27635 214 aaKnown RBP17.73■□□□□ 0.43
TRAM1-201ENST00000262213 TKTP29401 623 aaKnown RBP17.73■□□□□ 0.43
TRAM1-201ENST00000262213 PDAP1Q13442 181 aaKnown RBP17.73■□□□□ 0.43
TRAM1-201ENST00000262213 SLC25A52Q3SY17 297 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 MGAT5BQ3V5L5 792 aa17.73■□□□□ 0.43
TRAM1-201ENST00000262213 SH2D4BQ5SQS7 431 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms