RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 OR51B4Q9Y5P0 310 aa28.08■■■□□ 2.09
SMARCD3-201ENST00000262188 TICRRQ7Z2Z1 1910 aa28.07■■■□□ 2.08
SMARCD3-201ENST00000262188 KCNN4O15554 427 aa28.07■■■□□ 2.08
SMARCD3-201ENST00000262188 TTI1O43156 1089 aa28.07■■■□□ 2.08
SMARCD3-201ENST00000262188 HOXC11O43248 304 aaPredicted RBP28.07■■■□□ 2.08
SMARCD3-201ENST00000262188 RAD51CO43502 376 aa28.07■■■□□ 2.08
SMARCD3-201ENST00000262188 PRKD1Q15139 912 aaPredicted RBP28.07■■■□□ 2.08
SMARCD3-201ENST00000262188 PARP15Q460N3 678 aa28.07■■■□□ 2.08
SMARCD3-201ENST00000262188 IER5LQ5T953 404 aa28.07■■■□□ 2.08
SMARCD3-201ENST00000262188 SFTPA1Q8IWL2 248 aa28.07■■■□□ 2.08
SMARCD3-201ENST00000262188 TAB3Q8N5C8 712 aaPredicted RBP28.07■■■□□ 2.08
SMARCD3-201ENST00000262188 USP33Q8TEY7 942 aa28.07■■■□□ 2.08
SMARCD3-201ENST00000262188 ZNF419Q96HQ0 510 aaPredicted RBP28.07■■■□□ 2.08
SMARCD3-201ENST00000262188 EPC1Q9H2F5 836 aa28.07■■■□□ 2.08
SMARCD3-201ENST00000262188 USP29Q9HBJ7 922 aa28.07■■■□□ 2.08
SMARCD3-201ENST00000262188 VPS28Q9UK41 221 aa28.07■■■□□ 2.08
SMARCD3-201ENST00000262188 CHD5Q8TDI0 1954 aa28.07■■■□□ 2.08
SMARCD3-201ENST00000262188 ARHGAP42A6NI28 874 aa28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 SGK1O00141 431 aa28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 CHUKO15111 745 aa28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 IFNB1P01574 187 aa28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 GJA4P35212 333 aa28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 PTGIRP43119 386 aa28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 SLC7A5Q01650 507 aa28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 PPIDQ08752 370 aaKnown RBP28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 LINGO4Q6UY18 593 aa28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 CPA6Q8N4T0 437 aa28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 HDAC11Q96DB2 347 aa28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 TRIM51Q9BSJ1 452 aa28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 MAGEH1Q9H213 219 aa28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 CBX4O00257 560 aa28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 CACNG3O60359 315 aa28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 TULP3O75386 442 aa28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 KDSRQ06136 332 aa28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 FUT11Q495W5 492 aa28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 DRICH1Q6PGQ1 229 aaPredicted RBP28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 BZW1Q7L1Q6 419 aaKnown RBP28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 GSTA5Q7RTV2 222 aa28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 CCDC117Q8IWD4 279 aaPredicted RBP28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 HOMER3Q9NSC5 361 aa28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 THEGQ9P2T0 379 aa28.06■■■□□ 2.08
SMARCD3-201ENST00000262188 F5H423 210 aaPredicted RBP28.05■■■□□ 2.08
SMARCD3-201ENST00000262188 MX2P20592 715 aa28.05■■■□□ 2.08
SMARCD3-201ENST00000262188 FNTAP49354 379 aa28.05■■■□□ 2.08
SMARCD3-201ENST00000262188 YBEYP58557 167 aaPredicted RBP28.05■■■□□ 2.08
SMARCD3-201ENST00000262188 XRCC4Q13426 336 aa28.05■■■□□ 2.08
SMARCD3-201ENST00000262188 GEN1Q17RS7 908 aa28.05■■■□□ 2.08
SMARCD3-201ENST00000262188 ETFBKMTQ8IXQ9 262 aa28.05■■■□□ 2.08
SMARCD3-201ENST00000262188 VIPAS39Q9H9C1 493 aa28.05■■■□□ 2.08
SMARCD3-201ENST00000262188 ANTXRLA6NF34 631 aa28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 ITGAVP06756 1048 aa28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 CTSOP43234 321 aaPredicted RBP28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 VPS41P49754 854 aa28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 ZBTB17Q13105 803 aa28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 PREPLQ4J6C6 727 aaPredicted RBP28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 TMEM215Q68D42 235 aa28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 CDKL3Q8IVW4 592 aaPredicted RBP28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 MMGT1Q8N4V1 131 aa28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 ALLCQ8N6M5 410 aa28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 ATL2Q8NHH9 583 aa28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 FRMD8P1Q9BZ68 369 aaPredicted RBP28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 SP110Q9HB58 689 aa28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 KIAA1522Q9P206 1035 aaPredicted RBP28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 GGA2Q9UJY4 613 aa28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 RAD54BQ9Y620 910 aa28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 MIA3Q5JRA6 1907 aa28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 BCLAF3A2AJT9 711 aaKnown RBP28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 ZSCAN5CA6NGD5 496 aaPredicted RBP28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 LOC730098B7Z3J9 87 aa28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 CISD3P0C7P0 127 aa28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 DR1Q01658 176 aa28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 ITPRIPL2Q3MIP1 535 aa28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 SPATS2Q86XZ4 545 aaKnown RBP28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 CCDC13Q8IYE1 715 aa28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 HTR3CQ8WXA8 447 aa28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 ACE2Q9BYF1 805 aaPredicted RBP28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 RETREG1Q9H6L5 497 aa28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 PCYOX1Q9UHG3 505 aa28.04■■■□□ 2.08
SMARCD3-201ENST00000262188 TRIOO75962 3097 aa28.03■■■□□ 2.08
SMARCD3-201ENST00000262188 RHOXF2BP0C7M4 288 aa28.03■■■□□ 2.08
SMARCD3-201ENST00000262188 OPRD1P41143 372 aa28.03■■■□□ 2.08
SMARCD3-201ENST00000262188 OXCT1P55809 520 aa28.03■■■□□ 2.08
SMARCD3-201ENST00000262188 ARF5P84085 180 aa28.03■■■□□ 2.08
SMARCD3-201ENST00000262188 PLEKHG6Q3KR16 790 aa28.03■■■□□ 2.08
SMARCD3-201ENST00000262188 PUS10Q3MIT2 529 aaKnown RBP28.03■■■□□ 2.08
SMARCD3-201ENST00000262188 PITRM1Q5JRX3 1037 aa28.03■■■□□ 2.08
SMARCD3-201ENST00000262188 HEATR6Q6AI08 1181 aaKnown RBP28.03■■■□□ 2.08
SMARCD3-201ENST00000262188 CCDC110Q8TBZ0 833 aa28.03■■■□□ 2.08
SMARCD3-201ENST00000262188 SORCS1Q8WY21 1168 aa28.03■■■□□ 2.08
SMARCD3-201ENST00000262188 RHOXF2Q9BQY4 288 aa28.03■■■□□ 2.08
SMARCD3-201ENST00000262188 VPS51Q9UID3 782 aa28.03■■■□□ 2.08
SMARCD3-201ENST00000262188 FAM50BQ9Y247 325 aa28.03■■■□□ 2.08
SMARCD3-201ENST00000262188 DRG1Q9Y295 367 aaKnown RBP28.03■■■□□ 2.08
SMARCD3-201ENST00000262188 NCAM2O15394 837 aa28.02■■■□□ 2.08
SMARCD3-201ENST00000262188 PEX11BO96011 259 aa28.02■■■□□ 2.08
SMARCD3-201ENST00000262188 PABPC1P11940 636 aaKnown RBP28.02■■■□□ 2.08
SMARCD3-201ENST00000262188 ETFBP38117 255 aa28.02■■■□□ 2.08
SMARCD3-201ENST00000262188 DGKGP49619 791 aa28.02■■■□□ 2.08
SMARCD3-201ENST00000262188 WASHC5Q12768 1159 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms