RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 PPP1R14BQ96C90 147 aa23.02■■□□□ 1.28
MCF2L-201ENST00000261963 ZNF778Q96MU6 729 aa23.02■■□□□ 1.28
MCF2L-201ENST00000261963 BTBD9Q96Q07 612 aa23.02■■□□□ 1.28
MCF2L-201ENST00000261963 CNGB3Q9NQW8 809 aa23.02■■□□□ 1.28
MCF2L-201ENST00000261963 CCDC160A6NGH7 325 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 MEI4A8MW99 385 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 HHLA1C9JL84 531 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 ITM2AO43736 263 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 USP12O75317 370 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 SERPINA6P08185 405 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 TPI1P60174 286 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 TRIP10Q15642 601 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 FSCN1Q16658 493 aaKnown RBP23.01■■□□□ 1.27
MCF2L-201ENST00000261963 KLHDC10Q6PID8 442 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 CERS2Q96G23 380 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 AGAP3Q96P47 875 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 SUDS3Q9H7L9 328 aaPredicted RBP23.01■■□□□ 1.27
MCF2L-201ENST00000261963 CLPTM1O96005 669 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 POLBP06746 335 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 NCAM1P13591 858 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 CYP2B6P20813 491 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 LHX1P48742 406 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 ADARP55265 1226 aaKnown RBP23.01■■□□□ 1.27
MCF2L-201ENST00000261963 FOLH1Q04609 750 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 SULT2A1Q06520 285 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 PPIDQ08752 370 aaKnown RBP23.01■■□□□ 1.27
MCF2L-201ENST00000261963 TBL3Q12788 808 aaKnown RBP23.01■■□□□ 1.27
MCF2L-201ENST00000261963 PPM1JQ5JR12 505 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 TEDDM1Q5T9Z0 273 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 SHKBP1Q8TBC3 707 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 JADE3Q92613 823 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 LPPQ93052 612 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 PGAP3Q96FM1 320 aaPredicted RBP23.01■■□□□ 1.27
MCF2L-201ENST00000261963 SLC38A7Q9NVC3 462 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 DDIT4Q9NX09 232 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 SNX10Q9Y5X0 201 aa23.01■■□□□ 1.27
MCF2L-201ENST00000261963 LYPLA1O75608 230 aaPredicted RBP23■■□□□ 1.27
MCF2L-201ENST00000261963 CELF2O95319 508 aaKnown RBP23■■□□□ 1.27
MCF2L-201ENST00000261963 AP2A1O95782 977 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 KCNA4P22459 653 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 GMPRP36959 345 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 HCAR3P49019 387 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 HSP90AA5PQ58FG0 334 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 SPANXN3Q5MJ09 141 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 FBXL19Q6PCT2 694 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 TMEM86AQ8N2M4 240 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 EBF4Q9BQW3 602 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 TIMMDC1Q9NPL8 285 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 FAM105AQ9NUU6 356 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 DDX18Q9NVP1 670 aaKnown RBP23■■□□□ 1.27
MCF2L-201ENST00000261963 ST3GAL5Q9UNP4 418 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 Q9Y3F1 56 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 CDY2AQ9Y6F7 541 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23■■□□□ 1.27
MCF2L-201ENST00000261963 MYADML2A6NDP7 307 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 CCNT2O60583 730 aaKnown RBP23■■□□□ 1.27
MCF2L-201ENST00000261963 LTFP02788 710 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 CD68P34810 354 aaPredicted RBP23■■□□□ 1.27
MCF2L-201ENST00000261963 MRPS6P82932 125 aaKnown RBP23■■□□□ 1.27
MCF2L-201ENST00000261963 SLC25A3Q00325 362 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 CCNIQ14094 377 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 UBAP2LQ14157 1087 aaKnown RBP23■■□□□ 1.27
MCF2L-201ENST00000261963 PCLAFQ15004 111 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 ATG14Q6ZNE5 492 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 C2orf69Q8N8R5 385 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 RHOBTB2Q9BYZ6 727 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 RAD54BQ9Y620 910 aa23■■□□□ 1.27
MCF2L-201ENST00000261963 ZBTB24O43167 697 aaPredicted RBP22.99■■□□□ 1.27
MCF2L-201ENST00000261963 PROCP04070 461 aa22.99■■□□□ 1.27
MCF2L-201ENST00000261963 TFAP2AP05549 437 aa22.99■■□□□ 1.27
MCF2L-201ENST00000261963 GP5P40197 560 aa22.99■■□□□ 1.27
MCF2L-201ENST00000261963 ZBTB17Q13105 803 aa22.99■■□□□ 1.27
MCF2L-201ENST00000261963 KCTD11Q693B1 232 aa22.99■■□□□ 1.27
MCF2L-201ENST00000261963 TAF2Q6P1X5 1199 aa22.99■■□□□ 1.27
MCF2L-201ENST00000261963 PDZD4Q76G19 769 aaPredicted RBP22.99■■□□□ 1.27
MCF2L-201ENST00000261963 ABTB1Q969K4 478 aaPredicted RBP22.99■■□□□ 1.27
MCF2L-201ENST00000261963 PAAF1Q9BRP4 392 aa22.99■■□□□ 1.27
MCF2L-201ENST00000261963 DCDC2Q9UHG0 476 aa22.99■■□□□ 1.27
MCF2L-201ENST00000261963 PEX1O43933 1283 aa22.99■■□□□ 1.27
MCF2L-201ENST00000261963 C6orf222P0C671 652 aaPredicted RBP22.99■■□□□ 1.27
MCF2L-201ENST00000261963 AOC1P19801 751 aa22.99■■□□□ 1.27
MCF2L-201ENST00000261963 PPP1R14CQ8TAE6 165 aa22.99■■□□□ 1.27
MCF2L-201ENST00000261963 EDEM1Q92611 657 aa22.99■■□□□ 1.27
MCF2L-201ENST00000261963 MLPHQ9BV36 600 aaPredicted RBP22.99■■□□□ 1.27
MCF2L-201ENST00000261963 COLEC11Q9BWP8 271 aa22.99■■□□□ 1.27
MCF2L-201ENST00000261963 SORCS3Q9UPU3 1222 aa22.99■■□□□ 1.27
MCF2L-201ENST00000261963 THP07101 528 aa22.98■■□□□ 1.27
MCF2L-201ENST00000261963 SERPINB6P35237 376 aa22.98■■□□□ 1.27
MCF2L-201ENST00000261963 ATP2A3Q93084 1043 aa22.98■■□□□ 1.27
MCF2L-201ENST00000261963 CPNE1Q99829 537 aa22.98■■□□□ 1.27
MCF2L-201ENST00000261963 LRRC40Q9H9A6 602 aa22.98■■□□□ 1.27
MCF2L-201ENST00000261963 CASS4Q9NQ75 786 aa22.98■■□□□ 1.27
MCF2L-201ENST00000261963 TMEM216Q9P0N5 145 aa22.98■■□□□ 1.27
MCF2L-201ENST00000261963 VANGL2Q9ULK5 521 aa22.98■■□□□ 1.27
MCF2L-201ENST00000261963 PTCH2Q9Y6C5 1203 aa22.98■■□□□ 1.27
MCF2L-201ENST00000261963 ZCWPW2A0A1B0GU75 182 aa22.98■■□□□ 1.27
MCF2L-201ENST00000261963 IGHA2P01877 340 aa22.98■■□□□ 1.27
MCF2L-201ENST00000261963 HNRNPCP07910 306 aaKnown RBP eCLIP22.98■■□□□ 1.27
MCF2L-201ENST00000261963 F7P08709 466 aaPredicted RBP22.98■■□□□ 1.27
MCF2L-201ENST00000261963 CDK4P11802 303 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms