RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 NDUFS2O75306 463 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 OR7A10O76100 309 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 GRIA3P42263 894 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 CASP7P55210 303 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 GPX6P59796 221 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 FKBP9P1Q75LS8 142 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 KCNK18Q7Z418 384 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 PCYOX1LQ8NBM8 494 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 KCNN1Q92952 543 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 SEPHS2Q99611 448 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 ASPSCR1Q9BZE9 553 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 TRIM15Q9C019 465 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 MTMR12Q9C0I1 747 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 EXOSC4Q9NPD3 245 aaKnown RBP13.18□□□□□ -0.3
TMEM260-201ENST00000261556 PRDM5Q9NQX1 630 aaPredicted RBP13.18□□□□□ -0.3
TMEM260-201ENST00000261556 PNPOQ9NVS9 261 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 KCNH4Q9UQ05 1017 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 CPB1P15086 417 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 RBL1P28749 1068 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 OPRL1P41146 370 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 RPL35P42766 123 aaKnown RBP13.18□□□□□ -0.3
TMEM260-201ENST00000261556 HNRNPFP52597 415 aaKnown RBP13.18□□□□□ -0.3
TMEM260-201ENST00000261556 RACK1P63244 317 aaKnown RBP13.18□□□□□ -0.3
TMEM260-201ENST00000261556 CDKL1Q00532 357 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 EFL1Q7Z2Z2 1120 aaKnown RBP13.18□□□□□ -0.3
TMEM260-201ENST00000261556 AMIGO1Q86WK6 493 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 SFRP1Q8N474 314 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 CBR4Q8N4T8 237 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 ZCCHC9Q8N567 271 aaKnown RBP13.18□□□□□ -0.3
TMEM260-201ENST00000261556 RHOBTB2Q9BYZ6 727 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 GANQ9H2C0 597 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 APEX2Q9UBZ4 518 aa13.18□□□□□ -0.3
TMEM260-201ENST00000261556 WTIPA6NIX2 430 aaPredicted RBP13.17□□□□□ -0.3
TMEM260-201ENST00000261556 SCO1O75880 301 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 ATF6P18850 670 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 POU6F2P78424 691 aaPredicted RBP13.17□□□□□ -0.3
TMEM260-201ENST00000261556 KCNA1Q09470 495 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 TRIM32Q13049 653 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 KRR1Q13601 381 aaKnown RBP13.17□□□□□ -0.3
TMEM260-201ENST00000261556 HERC3Q15034 1050 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 SNRNP35Q16560 246 aaKnown RBP13.17□□□□□ -0.3
TMEM260-201ENST00000261556 ERAP2Q6P179 960 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 HDDC2Q7Z4H3 204 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 SHKBP1Q8TBC3 707 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 URGCPQ8TCY9 931 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 AIFM2Q9BRQ8 373 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 CNPY3Q9BT09 278 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 TXLNGYQ9BZA5 131 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 PIF1Q9H611 641 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 PPCSQ9HAB8 311 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 TCF7L2Q9NQB0 619 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 MTRRQ9UBK8 725 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 FAM8A1Q9UBU6 413 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 OGDHLQ9ULD0 1010 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 RIMS1Q86UR5 1692 aaKnown RBP13.17□□□□□ -0.3
TMEM260-201ENST00000261556 UQCRC1P31930 480 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 PUDPQ08623 228 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 RAB39AQ14964 217 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 EMC2Q15006 297 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 BROXQ5VW32 411 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 SYCE2Q6PIF2 218 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 ENOSF1Q7L5Y1 443 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 TDRD5Q8NAT2 981 aaKnown RBP13.17□□□□□ -0.3
TMEM260-201ENST00000261556 LSM14AQ8ND56 463 aaKnown RBP13.17□□□□□ -0.3
TMEM260-201ENST00000261556 MCFD2Q8NI22 146 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 SLC4A9Q96Q91 983 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 SPON2Q9BUD6 331 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 SAV1Q9H4B6 383 aaPredicted RBP13.17□□□□□ -0.3
TMEM260-201ENST00000261556 COL3A1P02461 1466 aaPredicted RBP13.17□□□□□ -0.3
TMEM260-201ENST00000261556 H0YJX3 145 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 MED26O95402 600 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 ZNF135P52742 658 aaPredicted RBP13.17□□□□□ -0.3
TMEM260-201ENST00000261556 BACE1P56817 501 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 OR2B6P58173 313 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 AASDHQ4L235 1098 aaPredicted RBP13.17□□□□□ -0.3
TMEM260-201ENST00000261556 KYAT3Q6YP21 454 aaKnown RBP13.17□□□□□ -0.3
TMEM260-201ENST00000261556 ANKRD13BQ86YJ7 626 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 HERC6Q8IVU3 1022 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 CHST13Q8NET6 341 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 NKX2-3Q8TAU0 364 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 COPS4Q9BT78 406 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 SEZ6LQ9BYH1 1024 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 DNPEPQ9ULA0 475 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 DCCP43146 1447 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 PXDNQ92626 1479 aa13.17□□□□□ -0.3
TMEM260-201ENST00000261556 H3BMQ9 156 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 STX16-NPEPL1H3BU86 382 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 MAGEB2O15479 319 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 SLC37A4O43826 429 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 SYNCRIPO60506 623 aaKnown RBP13.16□□□□□ -0.3
TMEM260-201ENST00000261556 AKAP3O75969 853 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 CD4P01730 458 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 UGT2B4P06133 528 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 FMO5P49326 533 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 NME5P56597 212 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 BCAR1P56945 870 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 SLC12A1Q13621 1099 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 TYSND1Q2T9J0 566 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 ERO1BQ86YB8 467 aa13.16□□□□□ -0.3
TMEM260-201ENST00000261556 CAMK1DQ8IU85 385 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms