RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 ALLCQ8N6M5 410 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 TCF12Q99081 682 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 CLCA2Q9UQC9 943 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 TSPAN4O14817 238 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 AVILO75366 819 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 VPS26AO75436 327 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 CYP2C9P11712 490 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 EPB42P16452 691 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 DDX5P17844 614 aaKnown RBP9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 ATF4P18848 351 aaPredicted RBP9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 NEK3P51956 506 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 TAS2R40P59535 323 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 LAMTOR4Q0VGL1 99 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 MSLNQ13421 630 aaPredicted RBP9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 THOC7Q6I9Y2 204 aaKnown RBP9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 NOTUMQ6P988 496 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 ITFG2Q969R8 447 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 NMRK2Q9NPI5 230 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 MBD2Q9UBB5 411 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 APOC4-APOC2K7ER74 178 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 APOC2P02655 101 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 RFX3P48380 749 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 ARSHQ5FYA8 562 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 IZUMO1Q8IYV9 350 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 ADAM32Q8TC27 787 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 TEKT5Q96M29 485 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 ZFP42Q96MM3 310 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 SEPT5Q99719 369 aaPredicted RBP9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 SPATA16Q9BXB7 569 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 ATXN3LQ9H3M9 355 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 ZMYM5Q9UJ78 669 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 CRLS1Q9UJA2 301 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 GRIN2DO15399 1336 aa9.89□□□□□ -0.83
CTDSPL2-201ENST00000260327 DDX3YO15523 660 aaKnown RBP9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 SSNA1O43805 119 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 EIF2S1P05198 315 aaKnown RBP9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 TPTEP56180 551 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 FGD3Q5JSP0 725 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 ZNF470Q6ECI4 717 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 BHMTQ93088 406 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 GJD4Q96KN9 370 aaPredicted RBP9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 UBXN6Q9BZV1 441 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 ACSS2Q9NR19 701 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 RGS18Q9NS28 235 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 INVSQ9Y283 1065 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 GMPPBQ9Y5P6 360 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 RBAK-RBAKDNI3L0D1 243 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 SNAP91O60641 907 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 SNRPB2P08579 225 aaKnown RBP9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 COPZ1P61923 177 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 XIAPP98170 497 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 TOP3AQ13472 1001 aaPredicted RBP9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 C10orf107Q8IVU9 208 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 DMRTB1Q96MA1 342 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 OMDQ99983 421 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 CADM1Q9BY67 442 aaKnown RBP9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 PRELID1Q9Y255 219 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 GNG14A0A1W2PPG7 69 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 NRP2O60462 931 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 ITGB6P18564 788 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 CCNG1P51959 295 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 BCAT1P54687 386 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 IL18R1Q13478 541 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 PAN2Q504Q3 1202 aaKnown RBP9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 ZNF570Q96NI8 536 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 PPP1R2P1Q96PQ5 205 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 GIN1Q9NXP7 522 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 PSMD13Q9UNM6 376 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 MRPS7Q9Y2R9 242 aaKnown RBP9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 RAD54BQ9Y620 910 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 A0A087WZ62 844 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 MEIS2O14770 477 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 ITGA2BP08514 1039 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 IL1R1P14778 569 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 GRIA4P48058 902 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 SHROOM1Q2M3G4 852 aaPredicted RBP9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 TTC23Q5W5X9 447 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 RASGEF1CQ8N431 466 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 SPATA6LQ8N4H0 392 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 MCFD2Q8NI22 146 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 FDXACB1Q9BRP7 624 aaPredicted RBP9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 ZNF224Q9NZL3 707 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 CDH22Q9UJ99 828 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 KIAA1257Q9ULG3 409 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 SLC9A8Q9Y2E8 581 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 GMEB1Q9Y692 573 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 GAKO14976 1311 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 TM7SF2O76062 418 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 CCDC166P0CW27 439 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 PCSK1P29120 753 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 ZNF268Q14587 947 aaPredicted RBP9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 SLC15A2Q16348 729 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 TAMM41Q96BW9 452 aa9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 CRNNQ9UBG3 495 aaPredicted RBP9.88□□□□□ -0.83
CTDSPL2-201ENST00000260327 E5RJQ4 531 aa9.87□□□□□ -0.83
CTDSPL2-201ENST00000260327 TRDMT1O14717 391 aaKnown RBP9.87□□□□□ -0.83
CTDSPL2-201ENST00000260327 TGFB1I1O43294 461 aa9.87□□□□□ -0.83
CTDSPL2-201ENST00000260327 TADA2AO75478 443 aa9.87□□□□□ -0.83
CTDSPL2-201ENST00000260327 DSG3P32926 999 aa9.87□□□□□ -0.83
CTDSPL2-201ENST00000260327 TNK2Q07912 1038 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms