RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 VPS4AQ9UN37 437 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 WDR81Q562E7 1941 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 APOC4-APOC2K7ER74 178 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 MRASO14807 208 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 UNC5CO95185 931 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 APOC2P02655 101 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 PROCP04070 461 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 RAB27AP51159 221 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 GMFBP60983 142 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 DLG4P78352 724 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 GCNT1Q02742 428 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 PCBP1Q15365 356 aaKnown RBP eCLIP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 ALG11Q2TAA5 492 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 FGD3Q5JSP0 725 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 BHLHB9Q6PI77 547 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 IL27RAQ6UWB1 636 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 MTSS1LQ765P7 747 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 STK32CQ86UX6 486 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CCDC36Q8IYA8 594 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 PGBD3Q8N328 593 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 UXS1Q8NBZ7 420 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 RNASE11Q8TAA1 199 aaKnown RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CKAP2Q8WWK9 683 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 PHF21BQ96EK2 531 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 NFKBIZQ9BYH8 718 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 SEMA6AQ9H2E6 1030 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 POLR1BQ9H9Y6 1135 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 MYOZ2Q9NPC6 264 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 SNX6Q9UNH7 406 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 SIK3Q9Y2K2 1263 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 ARHGEF17Q96PE2 2063 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 KPNA5O15131 536 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 FAM153BP0C7A2 387 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 NTSP30990 170 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 PPP4CP60510 307 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 MEA1Q16626 185 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 RFX4Q33E94 735 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 FAM153CQ494X1 144 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 VN1R5Q7Z5H4 357 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 FUKQ8N0W3 1084 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 SLC47A1Q96FL8 570 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CPB2Q96IY4 423 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 QRFPRQ96P65 431 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CDHR5Q9HBB8 845 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 ZNF112Q9UJU3 913 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CDH9Q9ULB4 789 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 ERGIC3Q9Y282 383 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 R3HDM2Q9Y2K5 976 aaKnown RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 MTF2Q9Y483 593 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 TGDSO95455 350 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 HIST1H2ABP04908 130 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 C6orf222P0C671 652 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 OR56A5P0C7T3 313 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 MBL2P11226 248 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 ZNF24P17028 368 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 HALP42357 657 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 ALDH9A1P49189 494 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 POLR2LP62875 67 aaKnown RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 MRPS22P82650 360 aaKnown RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 RRP1BQ14684 758 aaKnown RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 NRF1Q16656 503 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 LIPMQ5VYY2 423 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 NEK5Q6P3R8 708 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 HIST3H2AQ7L7L0 130 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 NIPA1Q7RTP0 329 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 RNF180Q86T96 592 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 ZNF513Q8N8E2 541 aaPredicted RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 NKX2-3Q8TAU0 364 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 HIST1H2ACQ93077 130 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 PANX3Q96QZ0 392 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CDRT15Q96T59 188 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 RTKNQ9BST9 563 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CHID1Q9BWS9 393 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CAPN10Q9HC96 672 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 ARMCX1Q9P291 453 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 TMA7Q9Y2S6 64 aaKnown RBP4.87□□□□□ -1.63
RC3H1-201ENST00000258349 SCN3AQ9NY46 2000 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 ATRNO75882 1429 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 RGSL1A5PLK6 1076 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CBX6O95503 412 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CTSHP09668 335 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 YY1P25490 414 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 MGAT1P26572 445 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 THPOP40225 353 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 GTF2A2P52657 109 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 PTSQ03393 145 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 LGALS3BPQ08380 585 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 PLCL1Q15111 1095 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 GLRA4Q5JXX5 417 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 SLC25A24Q6NUK1 477 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 MFSD7Q6UXD7 560 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 EMC1Q8N766 993 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 PDPRQ8NCN5 879 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 DNERQ8NFT8 737 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 MCOLN3Q8TDD5 553 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 VMP1Q96GC9 406 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 CCNB1IP1Q9NPC3 277 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 ZNF232Q9UNY5 417 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 ANGPT4Q9Y264 503 aa4.87□□□□□ -1.63
RC3H1-201ENST00000258349 ICE1Q9Y2F5 2266 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms