RNA–Protein interactions for RNA: ENST00000254351.8

SDC1-201, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC1, Length 3,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-201ENST00000254351 ACOT8O14734 319 aa14.61□□□□□ -0.07
SDC1-201ENST00000254351 HDAC3O15379 428 aa14.61□□□□□ -0.07
SDC1-201ENST00000254351 RGS20O76081 388 aa14.61□□□□□ -0.07
SDC1-201ENST00000254351 ATG7O95352 703 aa14.61□□□□□ -0.07
SDC1-201ENST00000254351 GOT1P17174 413 aa14.61□□□□□ -0.07
SDC1-201ENST00000254351 PFKPQ01813 784 aa14.61□□□□□ -0.07
SDC1-201ENST00000254351 AGKQ53H12 422 aa14.61□□□□□ -0.07
SDC1-201ENST00000254351 MAP1SQ66K74 1059 aaPredicted RBP14.61□□□□□ -0.07
SDC1-201ENST00000254351 OLFML1Q6UWY5 402 aa14.61□□□□□ -0.07
SDC1-201ENST00000254351 PODNQ7Z5L7 613 aa14.61□□□□□ -0.07
SDC1-201ENST00000254351 PGAM4Q8N0Y7 254 aa14.61□□□□□ -0.07
SDC1-201ENST00000254351 LZTR1Q8N653 840 aa14.61□□□□□ -0.07
SDC1-201ENST00000254351 RP9Q8TA86 221 aaKnown RBP14.61□□□□□ -0.07
SDC1-201ENST00000254351 SLC2A11Q9BYW1 496 aa14.61□□□□□ -0.07
SDC1-201ENST00000254351 BRD8Q9H0E9 1235 aa14.61□□□□□ -0.07
SDC1-201ENST00000254351 STN1Q9H668 368 aaKnown RBP14.61□□□□□ -0.07
SDC1-201ENST00000254351 PNPLA3Q9NST1 481 aa14.61□□□□□ -0.07
SDC1-201ENST00000254351 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.6□□□□□ -0.07
SDC1-201ENST00000254351 LSM1O15116 133 aaKnown RBP14.6□□□□□ -0.07
SDC1-201ENST00000254351 MED7O43513 233 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 NFICP08651 508 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 CYP3A5P20815 502 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 SDC4P31431 198 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 BMXP51813 675 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 MTA1Q13330 715 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 HMBOX1Q6NT76 420 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 GALNT18Q6P9A2 607 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 RSBN1LQ6PCB5 846 aaPredicted RBP14.6□□□□□ -0.07
SDC1-201ENST00000254351 CHSY3Q70JA7 882 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 BTLAQ7Z6A9 289 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 FAM131BQ86XD5 332 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 BPIFB6Q8NFQ5 453 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 DQX1Q8TE96 717 aaKnown RBP14.6□□□□□ -0.07
SDC1-201ENST00000254351 KCTD4Q8WVF5 259 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 IARS2Q9NSE4 1012 aaKnown RBP14.6□□□□□ -0.07
SDC1-201ENST00000254351 SMOXQ9NWM0 555 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 MTMR10Q9NXD2 777 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 PIM2Q9P1W9 311 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 SNX9Q9Y5X1 595 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 HTR3EA5X5Y0 456 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 C2CD4BA6NLJ0 364 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 H3BMQ9 156 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 TOR1BO14657 336 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 HCRTO43612 131 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 FAM189A1O60320 539 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 TNNC2P02585 160 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 MYL4P12829 197 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 MFSD4BQ5TF39 518 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 ZNF280DQ6N043 979 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 PID1Q7Z2X4 250 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 SLC15A4Q8N697 577 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 ARNTL2Q8WYA1 636 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 CERS2Q96G23 380 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 COG8Q96MW5 612 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 OSBPL11Q9BXB4 747 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 ACE2Q9BYF1 805 aaPredicted RBP14.6□□□□□ -0.07
SDC1-201ENST00000254351 MUC3BQ9H195 1237 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 XYLT2Q9H1B5 865 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 RNF146Q9NTX7 359 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 MKS1Q9NXB0 559 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 TSPAN16Q9UKR8 245 aa14.6□□□□□ -0.07
SDC1-201ENST00000254351 RBBP6Q7Z6E9 1792 aaKnown RBP14.59□□□□□ -0.07
SDC1-201ENST00000254351 MATN2O00339 956 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 ATP5BP06576 529 aaKnown RBP14.59□□□□□ -0.07
SDC1-201ENST00000254351 MAP4P27816 1152 aaKnown RBP14.59□□□□□ -0.07
SDC1-201ENST00000254351 HMOX2P30519 316 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 HSPA13P48723 471 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 BCAP31P51572 246 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 CLCN2P51788 898 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 CCDC92Q53HC0 331 aaPredicted RBP14.59□□□□□ -0.07
SDC1-201ENST00000254351 BRSK2Q8IWQ3 736 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 TRAPPC12Q8WVT3 735 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 SLCO4A1Q96BD0 722 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 ATG4CQ96DT6 458 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 LRCH3Q96II8 777 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 MPHOSPH6Q99547 160 aaKnown RBP14.59□□□□□ -0.07
SDC1-201ENST00000254351 PTPRHQ9HD43 1115 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 CNOT6Q9ULM6 557 aaKnown RBP14.59□□□□□ -0.07
SDC1-201ENST00000254351 PCDHGC3Q9UN70 934 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 RUVBL2Q9Y230 463 aaKnown RBP14.59□□□□□ -0.07
SDC1-201ENST00000254351 TCAF2A6NFQ2 919 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 GRID2O43424 1007 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 ZFXP17010 805 aaPredicted RBP14.59□□□□□ -0.07
SDC1-201ENST00000254351 CDH3P22223 829 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 RCVRNP35243 200 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 GPD2P43304 727 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 POU5F1BQ06416 359 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 CDK18Q07002 472 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 NIPAL4Q0D2K0 466 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 ZIK1Q3SY52 487 aaPredicted RBP14.59□□□□□ -0.07
SDC1-201ENST00000254351 CERCAMQ5T4B2 595 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 CARM1Q86X55 608 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 WDR49Q8IV35 697 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 CROCCP3Q8IVE0 287 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 URGCPQ8TCY9 931 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 HTR3CQ8WXA8 447 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 IRGQQ8WZA9 623 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 BCAP29Q9UHQ4 241 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 KANSL1LA0AUZ9 987 aa14.59□□□□□ -0.07
SDC1-201ENST00000254351 RNF103O00237 685 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms