RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 GPR15P49685 360 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 IFI35P80217 286 aaPredicted RBP13.5□□□□□ -0.25
SLIRP-201ENST00000238688 EFEMP1Q12805 493 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 KRT71Q3SY84 523 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 FAM72AQ5TYM5 149 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 FAM72DQ6L9T8 149 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 CYS1Q717R9 158 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 TAOK1Q7L7X3 1001 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 FAM72BQ86X60 149 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 KLHDC8BQ8IXV7 354 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 CCDC13Q8IYE1 715 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 HS6ST3Q8IZP7 471 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 ATPAF2Q8N5M1 289 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 TTC9BQ8N6N2 239 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 LEMD2Q8NC56 503 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 PYROXD1Q8WU10 500 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 P2RY11Q96G91 374 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 KXD1Q9BQD3 176 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 LRRC3Q9BY71 257 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 ZYG11BQ9C0D3 744 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 CNOT10Q9H9A5 744 aaKnown RBP13.5□□□□□ -0.25
SLIRP-201ENST00000238688 TBC1D17Q9HA65 648 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 SAYSD1Q9NPB0 183 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 NINJ2Q9NZG7 142 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 SENP1Q9P0U3 644 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 SFMBT1Q9UHJ3 866 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 LGALS13Q9UHV8 139 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 SLC24A2Q9UI40 661 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 XPO7Q9UIA9 1087 aaKnown RBP13.5□□□□□ -0.25
SLIRP-201ENST00000238688 MRPS23Q9Y3D9 190 aaKnown RBP13.5□□□□□ -0.25
SLIRP-201ENST00000238688 ACTL7BQ9Y614 415 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 HS3ST4Q9Y661 456 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 TICRRQ7Z2Z1 1910 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 VPS13AQ96RL7 3174 aa13.5□□□□□ -0.25
SLIRP-201ENST00000238688 DRGXA6NNA5 263 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 PROB1E7EW31 1015 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 LRG1P02750 347 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 ETS1P14921 441 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 GLULP15104 373 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 CHKAP35790 457 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 ETFBP38117 255 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 MAGEA3P43357 314 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 EPHA5P54756 1037 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 STARD6P59095 220 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 TNK2Q07912 1038 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 AP1B1Q10567 949 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 KLHL38Q2WGJ6 581 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 PARP15Q460N3 678 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 ZNF683Q8IZ20 524 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 ELMOD1Q8N336 334 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 DTWD2Q8NBA8 298 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 CCNYQ8ND76 341 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 ATOH1Q92858 354 aaPredicted RBP13.49□□□□□ -0.25
SLIRP-201ENST00000238688 CORO1BQ9BR76 489 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 ANLNQ9NQW6 1124 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 ARHGEF3Q9NR81 526 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 VPS18Q9P253 973 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 ZNF510Q9Y2H8 683 aa13.49□□□□□ -0.25
SLIRP-201ENST00000238688 NUP210Q8TEM1 1887 aaPredicted RBP13.48□□□□□ -0.25
SLIRP-201ENST00000238688 EP300Q09472 2414 aaPredicted RBP13.48□□□□□ -0.25
SLIRP-201ENST00000238688 SLC12A8A0AV02 714 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 ARHGAP42A6NI28 874 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 TRDMT1O14717 391 aaKnown RBP13.48□□□□□ -0.25
SLIRP-201ENST00000238688 RGS16O15492 202 aaPredicted RBP13.48□□□□□ -0.25
SLIRP-201ENST00000238688 MSI1O43347 362 aaKnown RBP13.48□□□□□ -0.25
SLIRP-201ENST00000238688 SUN1O94901 812 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 OAS1P00973 400 aaKnown RBP13.48□□□□□ -0.25
SLIRP-201ENST00000238688 DDX6P26196 483 aaKnown RBP eCLIP13.48□□□□□ -0.25
SLIRP-201ENST00000238688 CDC25CP30307 473 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 STX2P32856 288 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 SKOR1P84550 965 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 TWF1Q12792 350 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 PDIA2Q13087 525 aaKnown RBP13.48□□□□□ -0.25
SLIRP-201ENST00000238688 AUHQ13825 339 aaKnown RBP13.48□□□□□ -0.25
SLIRP-201ENST00000238688 PRPSAP1Q14558 356 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 TEX44Q53QW1 395 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 TNFAIP8L3Q5GJ75 292 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 MS4A13Q5J8X5 152 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 RABGAP1LQ5R372 815 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 SDHAF4Q5VUM1 108 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 TANGO2Q6ICL3 276 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 RWDD4Q6NW29 188 aaKnown RBP13.48□□□□□ -0.25
SLIRP-201ENST00000238688 KDM7AQ6ZMT4 941 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 MTSS1LQ765P7 747 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 LINC00523Q86TU6 105 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 NLRP14Q86W24 1093 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 CCDC117Q8IWD4 279 aaPredicted RBP13.48□□□□□ -0.25
SLIRP-201ENST00000238688 ZBED8Q8IZ13 594 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 TLCD1Q96CP7 247 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 ZSWIM3Q96MP5 696 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 LGMNQ99538 433 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 NACA2Q9H009 215 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 GBA3Q9H227 469 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 GDE1Q9NZC3 331 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 STOML2Q9UJZ1 356 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 ADAM21Q9UKJ8 722 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 AAR2Q9Y312 384 aaKnown RBP13.48□□□□□ -0.25
SLIRP-201ENST00000238688 GVINP1Q7Z2Y8 2422 aa13.48□□□□□ -0.25
SLIRP-201ENST00000238688 HELZP42694 1942 aaKnown RBP13.47□□□□□ -0.25
SLIRP-201ENST00000238688 KIF26AQ9ULI4 1882 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms