RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 RMND5BQ96G75 393 aaPredicted RBP14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 WRNIP1Q96S55 665 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 NPAS2Q99743 824 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 B3GNT5Q9BYG0 378 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 CAAP1Q9H8G2 361 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 MINDY3Q9H8M7 445 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 IPO11Q9UI26 975 aaKnown RBP14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 INO80B-WBP1J3KQ70 363 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 MFSD11O43934 449 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 YBX3P16989 372 aaKnown RBP eCLIP14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 TCN1P20061 433 aaPredicted RBP14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 GTF2A2P52657 109 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 KIZQ2M2Z5 673 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 EEPD1Q7L9B9 569 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 ZDHHC17Q8IUH5 632 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 TTC39CQ8N584 583 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 CCDC185Q8N715 623 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 DNERQ8NFT8 737 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 ZSCAN18Q8TBC5 510 aaPredicted RBP14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 LRTOMTQ8WZ04 291 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 ZNF669Q96BR6 464 aaPredicted RBP14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 DUS3LQ96G46 650 aaKnown RBP14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 FAM167AQ96KS9 214 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 UHRF1Q96T88 793 aaPredicted RBP14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 TMEM79Q9BSE2 394 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 ANKRD60Q9BZ19 345 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 MAF1Q9H063 256 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 SEMA6AQ9H2E6 1030 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 ACSS2Q9NR19 701 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 IGSF9Q9P2J2 1179 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 PCDHGA7Q9Y5G6 932 aa14.23□□□□□ -0.13
SCNN1A-201ENST00000228916 TRIM64CA6NLI5 447 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 TK2O00142 265 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 TIMM44O43615 452 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 CABYRO75952 493 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 F7P08709 466 aaPredicted RBP14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 STAG3L1P0CL83 205 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 CD97P48960 835 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 LY6KQ17RY6 165 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 TMEM132AQ24JP5 1023 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 LSMEM2Q8N112 164 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 LZTR1Q8N653 840 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 ZBTB8BQ8NAP8 495 aaPredicted RBP14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 ACVR1CQ8NER5 493 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 TRAPPC12Q8WVT3 735 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 MARK4Q96L34 752 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 C12orf42Q96LP6 360 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 SLC29A1Q99808 456 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 CEP41Q9BYV8 373 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 PDGFDQ9GZP0 370 aaPredicted RBP14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 VPS45Q9NRW7 570 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 HACL1Q9UJ83 578 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 LOC285556D6RIA3 1793 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 ENTPD1P49961 510 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 CSE1LP55060 971 aaKnown RBP14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 PDAP1Q13442 181 aaKnown RBP14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 KRT80Q6KB66 452 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 ZNF567Q8N184 647 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 FIBCD1Q8N539 461 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 SLCO4A1Q96BD0 722 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 C1QTNF1Q9BXJ1 281 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 AS3MTQ9HBK9 375 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 BPTFQ12830 3046 aa14.22□□□□□ -0.13
SCNN1A-201ENST00000228916 ZNF701M0R085 212 aaPredicted RBP14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 STAU1O95793 577 aaKnown RBP14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 NELFEP18615 380 aaKnown RBP14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 VARSP26640 1264 aaKnown RBP14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 ABCG1P45844 678 aa14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 PSME3P61289 254 aa14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 MBTD1Q05BQ5 628 aa14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 CBX3Q13185 183 aa14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 NXNQ6DKJ4 435 aa14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 ELMSAN1Q6PJG2 1045 aa14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 PATL1Q86TB9 770 aaKnown RBP14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 MYO1HQ8N1T3 1032 aa14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 PYROXD2Q8N2H3 581 aa14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 OR52K1Q8NGK4 314 aa14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 MAELQ96JY0 434 aaKnown RBP14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 ASB7Q9H672 318 aa14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 CLK4Q9HAZ1 481 aaKnown RBP14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 MRPL40Q9NQ50 206 aaKnown RBP14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 PICK1Q9NRD5 415 aa14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 C20orf96Q9NUD7 363 aaPredicted RBP14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 RCOR3Q9P2K3 495 aaPredicted RBP14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 SLC8A2Q9UPR5 921 aa14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 SNX9Q9Y5X1 595 aa14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 TCRBV3S1A0A5B6 114 aa14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 CSPG5O95196 566 aa14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 NAGLUP54802 743 aa14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 OLIG2Q13516 323 aa14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 SLC26A9Q7LBE3 791 aa14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 SEPT1Q8WYJ6 367 aa14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 ADA2Q9NZK5 511 aa14.21□□□□□ -0.13
SCNN1A-201ENST00000228916 TRIM24O15164 1050 aa14.21□□□□□ -0.14
SCNN1A-201ENST00000228916 HTRA2O43464 458 aaPredicted RBP14.21□□□□□ -0.14
SCNN1A-201ENST00000228916 DPEP1P16444 411 aa14.21□□□□□ -0.14
SCNN1A-201ENST00000228916 ARL4AP40617 200 aa14.21□□□□□ -0.14
SCNN1A-201ENST00000228916 PHKA2P46019 1235 aa14.21□□□□□ -0.14
SCNN1A-201ENST00000228916 MPP3Q13368 585 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms