RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 ZCCHC23Q6ZST2 131 aa25.39■■□□□ 1.65
RUNDC3A-201ENST00000225441 CRIPAKQ8N1N5 446 aa25.39■■□□□ 1.65
RUNDC3A-201ENST00000225441 JADE3Q92613 823 aa25.39■■□□□ 1.65
RUNDC3A-201ENST00000225441 TBC1D13Q9NVG8 400 aa25.39■■□□□ 1.65
RUNDC3A-201ENST00000225441 TIMM44O43615 452 aa25.38■■□□□ 1.65
RUNDC3A-201ENST00000225441 ITM2AO43736 263 aa25.38■■□□□ 1.65
RUNDC3A-201ENST00000225441 PRKCGP05129 697 aa25.38■■□□□ 1.65
RUNDC3A-201ENST00000225441 RAG1P15918 1043 aa25.38■■□□□ 1.65
RUNDC3A-201ENST00000225441 IDH3AP50213 366 aa25.38■■□□□ 1.65
RUNDC3A-201ENST00000225441 COPAP53621 1224 aa25.38■■□□□ 1.65
RUNDC3A-201ENST00000225441 DSC1Q08554 894 aa25.38■■□□□ 1.65
RUNDC3A-201ENST00000225441 IKBKEQ14164 716 aa25.38■■□□□ 1.65
RUNDC3A-201ENST00000225441 NPAS4Q8IUM7 802 aa25.38■■□□□ 1.65
RUNDC3A-201ENST00000225441 C10orf107Q8IVU9 208 aa25.38■■□□□ 1.65
RUNDC3A-201ENST00000225441 UNC5BQ8IZJ1 945 aa25.38■■□□□ 1.65
RUNDC3A-201ENST00000225441 ABI1Q8IZP0 508 aa25.38■■□□□ 1.65
RUNDC3A-201ENST00000225441 PANX3Q96QZ0 392 aa25.38■■□□□ 1.65
RUNDC3A-201ENST00000225441 SORT1Q99523 831 aa25.38■■□□□ 1.65
RUNDC3A-201ENST00000225441 CCDC28BQ9BUN5 200 aa25.38■■□□□ 1.65
RUNDC3A-201ENST00000225441 KLHL8Q9P2G9 620 aaPredicted RBP25.38■■□□□ 1.65
RUNDC3A-201ENST00000225441 GABRDO14764 452 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 HOXA2O43364 376 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 HCRTO43612 131 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 F9P00740 461 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 PTPN3P26045 913 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 ZNF33AQ06730 810 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 C1orf146Q5VVC0 180 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 ZNF280BQ86YH2 543 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 SENP8Q96LD8 212 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 SNX15Q9NRS6 342 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 NDE1Q9NXR1 346 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 SCOCQ9UIL1 159 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 MAGEA13PA6NCF6 341 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 B4GALT3O60512 393 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 SIN3BO75182 1162 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 DDHD2O94830 711 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 CRADDP78560 199 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 BTKQ06187 659 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 ARL13BQ3SXY8 428 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 OSTM1Q86WC4 334 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 CCDC33Q8N5R6 958 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 RDH11Q8TC12 318 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 CASD1Q96PB1 797 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 CNGB3Q9NQW8 809 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 TMEM216Q9P0N5 145 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 SEPT10Q9P0V9 454 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 VANGL2Q9ULK5 521 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 PSAT1Q9Y617 370 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 TSC2P49815 1807 aa25.37■■□□□ 1.65
RUNDC3A-201ENST00000225441 A0A088AWK7 358 aa25.36■■□□□ 1.65
RUNDC3A-201ENST00000225441 ZNF195O14628 629 aa25.36■■□□□ 1.65
RUNDC3A-201ENST00000225441 CREB3O43889 395 aa25.36■■□□□ 1.65
RUNDC3A-201ENST00000225441 B3GAT3O94766 335 aa25.36■■□□□ 1.65
RUNDC3A-201ENST00000225441 KCNA4P22459 653 aa25.36■■□□□ 1.65
RUNDC3A-201ENST00000225441 PAX3P23760 479 aa25.36■■□□□ 1.65
RUNDC3A-201ENST00000225441 KCTD11Q693B1 232 aa25.36■■□□□ 1.65
RUNDC3A-201ENST00000225441 HDAC11Q96DB2 347 aa25.36■■□□□ 1.65
RUNDC3A-201ENST00000225441 GBA3Q9H227 469 aa25.36■■□□□ 1.65
RUNDC3A-201ENST00000225441 VCX3BQ9H321 246 aa25.36■■□□□ 1.65
RUNDC3A-201ENST00000225441 FBXW11Q9UKB1 542 aa25.36■■□□□ 1.65
RUNDC3A-201ENST00000225441 ANKRD6Q9Y2G4 727 aa25.36■■□□□ 1.65
RUNDC3A-201ENST00000225441 TTC3P53804 2025 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 FAM200BP0CF97 657 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 CSF2RAP15509 400 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 SERPINB6P35237 376 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 IRX4P78413 519 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 UBAP2LQ14157 1087 aaKnown RBP25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 FAM182AQ5T1J6 154 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 DCLRE1AQ6PJP8 1040 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 CD300LGQ6UXG3 332 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 CLEC20AQ6ZU45 233 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 CLEC14AQ86T13 490 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 COLGALT2Q8IYK4 626 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 TMEM86AQ8N2M4 240 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 DCLK2Q8N568 766 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 FBXO27Q8NI29 283 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 DTX3LQ8TDB6 740 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 ACTRT2Q8TDY3 377 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 KRT82Q9NSB4 513 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 MICAL3Q7RTP6 2002 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 LYPLA1O75608 230 aaPredicted RBP25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 NEBLO76041 1014 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 LINGO3P0C6S8 592 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 ERVK-10P10266 1014 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 ERCC2P18074 760 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 ACAT1P24752 427 aaKnown RBP25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 CRABP2P29373 138 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 POLD2P49005 469 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 GATMP50440 423 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 XIAPP98170 497 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 ANKRD20A4Q4UJ75 823 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 TIGD5Q53EQ6 642 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 TMEM154Q6P9G4 183 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 PGM2L1Q6PCE3 622 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 PAQR9Q6ZVX9 377 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 TMEM199Q8N511 208 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 FAM193BQ96PV7 902 aaPredicted RBP25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 IL22Q9GZX6 179 aa25.35■■□□□ 1.65
RUNDC3A-201ENST00000225441 PIGVQ9NUD9 493 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms