RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 ENOPH1Q9UHY7 261 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 ATP6V1B1P15313 513 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 SELPP16109 830 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 C21orf59P57076 290 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 DLG4P78352 724 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 SMARCB1Q12824 385 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 TUSC3Q13454 348 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 FASTKQ14296 549 aaKnown RBP19.21■□□□□ 0.67
SMPD3-201ENST00000219334 STXBP5Q5T5C0 1151 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 TYW3Q6IPR3 259 aaKnown RBP19.21■□□□□ 0.67
SMPD3-201ENST00000219334 SRLQ86TD4 932 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 LRRC52Q8N7C0 313 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 TMEM237Q96Q45 408 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 ETNK2Q9NVF9 386 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 SMIM35A0A1B0GVV1 85 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 ACADSP16219 412 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 IFNGR2P38484 337 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 SARSP49591 514 aaKnown RBP19.21■□□□□ 0.67
SMPD3-201ENST00000219334 DDR2Q16832 855 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 TMEM26Q6ZUK4 368 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 PROX1Q92786 737 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 MTERF3Q96E29 417 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 ROGDIQ9GZN7 287 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 DMGDHQ9UI17 866 aaKnown RBP19.21■□□□□ 0.67
SMPD3-201ENST00000219334 ZNF711Q9Y462 761 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 PCDHGA4Q9Y5G9 962 aa19.21■□□□□ 0.67
SMPD3-201ENST00000219334 FTH1P02794 183 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 CCNB1P14635 433 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 PSMC3P17980 439 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 PAICSP22234 425 aaKnown RBP19.2■□□□□ 0.66
SMPD3-201ENST00000219334 TBCELQ5QJ74 424 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 GATAD2AQ86YP4 633 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 MCCC1Q96RQ3 725 aaPredicted RBP19.2■□□□□ 0.66
SMPD3-201ENST00000219334 RPTORQ8N122 1335 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 A0A0B4J269 797 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 URADA6NGE7 173 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 ADRB2P07550 413 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 PSMB4P28070 264 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 PLK1P53350 603 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 BIKQ13323 160 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 TRIM71Q2Q1W2 868 aaKnown RBP19.2■□□□□ 0.66
SMPD3-201ENST00000219334 ZBTB49Q6ZSB9 765 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 TOP6BLQ8N6T0 577 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 SELENOMQ8WWX9 145 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 ACSL4O60488 711 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 COX7A2P14406 83 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 TTPAP49638 278 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 SDHAF4Q5VUM1 108 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 EPS8L1Q8TE68 723 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 COL26A1Q96A83 441 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 TPD52L3Q96J77 140 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 SEMA3CQ99985 751 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 FAIM2Q9BWQ8 316 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 TRIT1Q9H3H1 467 aaKnown RBP19.2■□□□□ 0.66
SMPD3-201ENST00000219334 EPS8L2Q9H6S3 715 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 PARNO95453 639 aaKnown RBP19.2■□□□□ 0.66
SMPD3-201ENST00000219334 FGBP02675 491 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 FGD3Q5JSP0 725 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 NT5DC1Q5TFE4 455 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 AFTPHQ6ULP2 937 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 DNAJC14Q6Y2X3 702 aaPredicted RBP19.2■□□□□ 0.66
SMPD3-201ENST00000219334 KRT73Q86Y46 540 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 SPPL2BQ8TCT7 592 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 TCP10LQ8TDR4 215 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 USP6NLQ92738 828 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 ZMAT2Q96NC0 199 aaKnown RBP19.2■□□□□ 0.66
SMPD3-201ENST00000219334 SEPHS2Q99611 448 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 AP4S1Q9Y587 144 aa19.2■□□□□ 0.66
SMPD3-201ENST00000219334 ASTN2O75129 1339 aaPredicted RBP19.2■□□□□ 0.66
SMPD3-201ENST00000219334 VAV1P15498 845 aa19.19■□□□□ 0.66
SMPD3-201ENST00000219334 NFKB1P19838 968 aa19.19■□□□□ 0.66
SMPD3-201ENST00000219334 TNFSF9P41273 254 aa19.19■□□□□ 0.66
SMPD3-201ENST00000219334 LYPLAL1Q5VWZ2 237 aa19.19■□□□□ 0.66
SMPD3-201ENST00000219334 OXCT2Q9BYC2 517 aaPredicted RBP19.19■□□□□ 0.66
SMPD3-201ENST00000219334 DUSP12Q9UNI6 340 aa19.19■□□□□ 0.66
SMPD3-201ENST00000219334 GLI1P08151 1106 aa19.19■□□□□ 0.66
SMPD3-201ENST00000219334 RPL21P46778 160 aaKnown RBP19.19■□□□□ 0.66
SMPD3-201ENST00000219334 IRX1P78414 480 aaPredicted RBP19.19■□□□□ 0.66
SMPD3-201ENST00000219334 SEMA4DQ92854 862 aa19.19■□□□□ 0.66
SMPD3-201ENST00000219334 ABCG4Q9H172 646 aa19.19■□□□□ 0.66
SMPD3-201ENST00000219334 ATAD3AQ9NVI7 634 aa19.19■□□□□ 0.66
SMPD3-201ENST00000219334 KLQ9UEF7 1012 aa19.19■□□□□ 0.66
SMPD3-201ENST00000219334 C1orf232A0A0U1RR37 186 aa19.19■□□□□ 0.66
SMPD3-201ENST00000219334 CACNB4O00305 520 aaPredicted RBP19.19■□□□□ 0.66
SMPD3-201ENST00000219334 GCATO75600 419 aa19.19■□□□□ 0.66
SMPD3-201ENST00000219334 FASP25445 335 aa19.19■□□□□ 0.66
SMPD3-201ENST00000219334 IL31RAQ8NI17 732 aa19.19■□□□□ 0.66
SMPD3-201ENST00000219334 SNX6Q9UNH7 406 aa19.19■□□□□ 0.66
SMPD3-201ENST00000219334 RPA3P35244 121 aaPredicted RBP19.19■□□□□ 0.66
SMPD3-201ENST00000219334 CLK3P49761 638 aaKnown RBP19.19■□□□□ 0.66
SMPD3-201ENST00000219334 AGMOQ6ZNB7 445 aa19.19■□□□□ 0.66
SMPD3-201ENST00000219334 OR52K1Q8NGK4 314 aa19.19■□□□□ 0.66
SMPD3-201ENST00000219334 RERGQ96A58 199 aaPredicted RBP19.19■□□□□ 0.66
SMPD3-201ENST00000219334 SNRNP25Q9BV90 132 aaKnown RBP19.19■□□□□ 0.66
SMPD3-201ENST00000219334 MAPRE3Q9UPY8 281 aa19.19■□□□□ 0.66
SMPD3-201ENST00000219334 COL1A2P08123 1366 aa19.19■□□□□ 0.66
SMPD3-201ENST00000219334 MAMLD1Q13495 774 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 MON1AQ86VX9 555 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 SLAIN1Q8ND83 568 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 MYCBPAPQ8TBZ2 947 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms